PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.H00911.1.p

Common Name

LOC105961642, MIMGU_mgv1a012915mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

bHLH

Protein Properties

Length: 237aa MW: 26578.8 Da PI: 6.2408

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.H00911.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	15.7	2.8e-05	30	75	2	51
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYI 51 + + erE+ Rdr+N+ f L + l + ++ + Ka+iL+++v+ + Migut.H00911.1.p 30 KIHKAEREKLKRDRMNELFLDLGRTLDLD----HPNNGKASILRETVRLL 75 667889*****************9987....89999******9876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	1.71E-4	26	82	No hit	No description
Gene3D	G3DSA:4.10.280.10	6.2E-7	28	97	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	10.963	28	78	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	3.93E-10	29	92	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence Send to blast
MASETADPVN VSTRKCHSSS KKNAAKIPRK IHKAEREKLK RDRMNELFLD LGRTLDLDHP 60 NNGKASILRE TVRLLGELLT QVDNLKKENT TLLSESNYVT IEKNELLEET LTLDAQIKNL 120 QREIEERADN NNCSNLDVNT QSQSNGTTHV PVEEHVSFPL VVHASESTSA VGPVFVVPLH 180 HESQLGLLNP FNIEVDMDMP KARSNVSRPR ARYPSSYDSW PSHILTTNQP NLIEDV*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.H00911.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012841332.1	1e-174	PREDICTED: transcription factor bHLH47-like
TrEMBL	A0A022R299	1e-172	A0A022R299_ERYGU; Uncharacterized protein
STRING	Migut.H00911.1.p	1e-173	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4307	19	34

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47640.3	8e-35	bHLH family protein

Link Out ? help Back to Top
Phytozome	Migut.H00911.1.p
Entrez Gene	105961642