PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.H01455.1.p

Common Name

MIMGU_mgv1a010901mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

TCP

Protein Properties

Length: 299aa MW: 33432.4 Da PI: 6.0427

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.H01455.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	97.6	2.4e-30	76	156	2	79
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...ssssaseceaesss 79 ++kd+hsk++T++g+RdRR Rls +a++f+d+qd+LG+d++sk+i+WL+++ak ai++l + ++++s+ +++ Migut.H01455.1.p 76 VVGKDKHSKVSTARGPRDRRLRLSPITAIQFYDVQDRLGYDRPSKAIDWLIKEAKSAIDALDDHeliHQPPPSANGEAQLI 156 578**********************************************************99966644444333333333 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	5.7E-28	78	140	IPR005333	Transcription factor, TCP
PROSITE profile	PS51369	29.247	78	136	IPR017887	Transcription factor TCP subgroup

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence Send to blast
MFPPNYNNLQ ELDELHGQET LCNNYYNQHF GQKSVASSTM EEGFDFASLT KPKKRKAEDR 60 LIGKVHRGGR LVRAAVVGKD KHSKVSTARG PRDRRLRLSP ITAIQFYDVQ DRLGYDRPSK 120 AIDWLIKEAK SAIDALDDHE LIHQPPPSAN GEAQLILNDD NKPGSGFSKI LQVEPGQGYD 180 PFHYPGFGQG FCSGLLTTDT CPEITENNSS EIERLQKVIK AWNYCDAGNI TLMETNFQAQ 240 PIFCHREPLQ SSVVNYSPII PHFPVFGFSD ELSSITAAAT LLKDDENNNY NIINSIFQ*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zkt_A	1e-19	83	136	1	54	Putative transcription factor PCF6
5zkt_B	1e-19	83	136	1	54	Putative transcription factor PCF6
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.H01455.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011087013.1	2e-50	transcription factor TCP4-like
TrEMBL	A0A022RTM5	0.0	A0A022RTM5_ERYGU; Uncharacterized protein
STRING	Migut.H01455.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4112	21	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31070.1	3e-29	TCP domain protein 10

Link Out ? help Back to Top
Phytozome	Migut.H01455.1.p