PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.H01640.1.p

Common Name

LOC105962173, MIMGU_mgv1a014405mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

G2-like

Protein Properties

Length: 191aa MW: 20727.2 Da PI: 6.5063

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.H01640.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	29.9	1.2e-09	1	20	36	55
G2-like 36 mkvkgLtlehvkSHLQkYRl 55 m+vkgLtl h+kSHLQkYRl Migut.H01640.1.p 1 MSVKGLTLFHLKSHLQKYRL 20 99*****************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	3.6E-8	1	21	IPR009057	Homeodomain-like
Pfam	PF14379	6.1E-15	61	105	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence Send to blast
MSVKGLTLFH LKSHLQKYRL GKQSGKEFGE ASKDGSYHLD SPRASTPPQN LLSSDMNMGY 60 EVKEALRAQM EVQSKLHLQV EAEKHVQIRQ NAESRYMAML ERACEMFANQ ILGAADTSND 120 GDGYEGKGTE SCLTSHESCV GFLPEGSSKR RVINTGSANA SFVWGESDAY TPDLHLVQVS 180 NSHGIAGCGV *

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator (PubMed:26586833). Acts redundantly with PHR1 as a key component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). {ECO:0000269\|PubMed:26586833}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.H01640.1.p

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated in roots by low Pi. {ECO:0000269\|PubMed:26586833}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012841920.1	1e-141	PREDICTED: myb family transcription factor APL-like
Swissprot	Q94A57	5e-29	PHL2_ARATH; Protein PHR1-LIKE 2
TrEMBL	A0A022R4S3	1e-140	A0A022R4S3_ERYGU; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA9764	20	27

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	2e-31	G2-like family protein

Link Out ? help Back to Top
Phytozome	Migut.H01640.1.p
Entrez Gene	105962173

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546]