PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H01685.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 332aa    MW: 38060.4 Da    PI: 9.1643
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H01685.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM159.11.8e-49261562128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratk..sgyWkatgkdke 91 
                        pGfrFhPtdeelv +yLk+k+e++++++ e ik++diyk++PwdLpk+ +  ++kewyfF+kr +ky++++r+nr+t   sg+Wkatg dk+
  Migut.H01685.1.p  26 LPGFRFHPTDEELVGFYLKRKIEKRPIRI-ELIKQADIYKYDPWDLPKSSDVgDDKEWYFFCKRGRKYRNSTRPNRVTGtgSGFWKATGIDKP 117
                       59***************************.89***************644433778********************8554499********** PP

               NAM  92 vlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       v+s   ++  +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  Migut.H01685.1.p 118 VYSGagDKCIIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 156
                       ***8555556***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.42E-5425189IPR003441NAC domain
PROSITE profilePS5100553.48125189IPR003441NAC domain
PfamPF023652.0E-2527156IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MEVKNVSSSK ITNNNNELEE DDDVQLPGFR FHPTDEELVG FYLKRKIEKR PIRIELIKQA  60
DIYKYDPWDL PKSSDVGDDK EWYFFCKRGR KYRNSTRPNR VTGTGSGFWK ATGIDKPVYS  120
GAGDKCIIGL KKSLVYYRGS AGKGTKTDWM MHEFRLPASH DGKTITKNGV TKNFAQEAEV  180
WTLCRILKRN VTYKNCAQDW REVAANKNTI INNNNNNNNN NNNIPIINSN YSKACNNNVY  240
YSNQNSQISY NIINFNAQIN NNNYYNYNIP NNYQQRDFPG RNFLSSTSSL SSSVDIISDE  300
FLRRADWEDL RSVVDCAAAL SPYITKNCNS V*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-44191908166NO APICAL MERISTEM PROTEIN
1ut4_B3e-44191908166NO APICAL MERISTEM PROTEIN
1ut7_A3e-44191908166NO APICAL MERISTEM PROTEIN
1ut7_B3e-44191908166NO APICAL MERISTEM PROTEIN
3swm_A3e-441919011169NAC domain-containing protein 19
3swm_B3e-441919011169NAC domain-containing protein 19
3swm_C3e-441919011169NAC domain-containing protein 19
3swm_D3e-441919011169NAC domain-containing protein 19
3swp_A3e-441919011169NAC domain-containing protein 19
3swp_B3e-441919011169NAC domain-containing protein 19
3swp_C3e-441919011169NAC domain-containing protein 19
3swp_D3e-441919011169NAC domain-containing protein 19
4dul_A3e-44191908166NAC domain-containing protein 19
4dul_B3e-44191908166NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269|PubMed:22345491}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00353DAPTransfer from AT3G12910Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H01685.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269|PubMed:22345491}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012841872.10.0PREDICTED: transcription factor JUNGBRUNNEN 1-like
SwissprotQ9SK551e-80NAC42_ARATH; Transcription factor JUNGBRUNNEN 1
TrEMBLA0A022R2D00.0A0A022R2D0_ERYGU; Uncharacterized protein
STRINGMigut.H01685.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16972469
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.15e-79NAC domain containing protein 42
Publications ? help Back to Top
  1. Shahnejat-Bushehri S,Nobmann B,Devi Allu A,Balazadeh S
    JUB1 suppresses Pseudomonas syringae-induced defense responses through accumulation of DELLA proteins.
    Plant Signal Behav, 2016. 11(6): p. e1181245
    [PMID:27159137]
  2. Shahnejat-Bushehri S,Tarkowska D,Sakuraba Y,Balazadeh S
    Arabidopsis NAC transcription factor JUB1 regulates GA/BR metabolism and signalling.
    Nat Plants, 2016. 2: p. 16013
    [PMID:27249348]
  3. Shahnejat-Bushehri S, et al.
    Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato.
    Front Plant Sci, 2017. 8: p. 214
    [PMID:28326087]
  4. Sakuraba Y,Bülbül S,Piao W,Choi G,Paek NC
    Arabidopsis EARLY FLOWERING3 increases salt tolerance by suppressing salt stress response pathways.
    Plant J., 2017. 92(6): p. 1106-1120
    [PMID:29032592]
  5. Ebrahimian-Motlagh S, et al.
    JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13.
    Front Plant Sci, 2017. 8: p. 2118
    [PMID:29326734]