PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H01739.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 108aa    MW: 12370.7 Da    PI: 4.7014
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H01739.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.29.1e-09451247
                      SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                       rWT eE +++ d+  ++ g+   +W++Ia+++  ++t+ ++  ++  +
  Migut.H01739.1.p  4 SRWTWEENKQFEDGLVEFAGDcpnRWERIAARIA-TKTAAEVEQHFAVL 51
                      59*****************99*************.**********9765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.702152IPR017877Myb-like domain
SMARTSM007175.9E-4254IPR001005SANT/Myb domain
SuperFamilySSF466895.83E-11460IPR009057Homeodomain-like
PfamPF002491.6E-6551IPR001005SANT/Myb domain
CDDcd001671.90E-5552No hitNo description
Gene3DG3DSA:1.10.10.602.0E-4553IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    Send to blast
MVNSRWTWEE NKQFEDGLVE FAGDCPNRWE RIAARIATKT AAEVEQHFAV LLDDVAAIES  60
GVIELPEYDE SDGFRSPESR KSPNRSEKKQ VAPQRKVARP WTEDEHR*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H01739.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012841831.11e-74PREDICTED: transcription factor DIVARICATA-like
TrEMBLA0A0K1SBI72e-49A0A0K1SBI7_REHGL; MYB-related protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11280.24e-13MYB family protein