PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H01796.1.p
Common NameLOC105962049, MIMGU_mgv1a013001mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 234aa    MW: 25305.2 Da    PI: 9.0189
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H01796.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.22.7e-202977355
               AP2  3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      ++GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++aa+++l+g
  Migut.H01796.1.p 29 FRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAARSLRG 77
                      8*******.**********883....5*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008479.8E-132877IPR001471AP2/ERF domain
SMARTSM003802.5E-372891IPR001471AP2/ERF domain
CDDcd000181.83E-182885No hitNo description
PROSITE profilePS5103223.2092885IPR001471AP2/ERF domain
SuperFamilySSF541713.2E-222985IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.2E-312985IPR001471AP2/ERF domain
PRINTSPR003672.5E-102940IPR001471AP2/ERF domain
PRINTSPR003672.5E-105167IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MRKGRTAAAA AVQGGGEANG SGGSKEIRFR GVRKRPWGRY AAEIRDPWKK TRVWLGTFDS  60
AEDAARAYDA AARSLRGPKA RTNFPPPPNA AVFPDFNPRN PNQPHINSNP NDPLMDSRYY  120
TQDQQLIAQQ RPTTSGMSST VESFSGPRAP PPPRPLIAQQ QRRHPRSPPV VPDDCRSDCD  180
SSSSVVDDAE CDIASSSCKK PLAFDLNMPP PPPTPMDAAA SDLDELACTA LRL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-212389976Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H01796.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012841774.11e-169PREDICTED: ethylene-responsive transcription factor 3
SwissprotQ9SXS87e-59ERF3_TOBAC; Ethylene-responsive transcription factor 3
TrEMBLA0A022R4A61e-168A0A022R4A6_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33302347
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.12e-28ethylene responsive element binding factor 3