PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.H01929.1.p

Common Name

LOC105970357, MIMGU_mgv1a027050mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

FAR1

Protein Properties

Length: 262aa MW: 30119.5 Da PI: 5.301

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.H01929.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	91.1	1.5e-28	95	182	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++ k r+r+etr+gC+a++ v+k ++gkw vtk+++eH H+l+p Migut.H01929.1.p 95 FYNSYATRVGFVIRVSKLSRSRRDGSAIGRALVCNKEGFRMPDKRE--KIVRQRTETRVGCRAMVLVRKINSGKWIVTKFVKEHAHSLTP 182 ****************************************9988..9************************************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.4E-25	95	182	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence Send to blast
MEYEIDGDLN GEVVGSSTNF ESRTEDNDID NDNPILESSA DVAFHQELEI KVDDEDSSDR 60 ELFRLDELQD VNCSNPTDEP YVGQEFDSEA EAHAFYNSYA TRVGFVIRVS KLSRSRRDGS 120 AIGRALVCNK EGFRMPDKRE KIVRQRTETR VGCRAMVLVR KINSGKWIVT KFVKEHAHSL 180 TPGRGRKDLI YDQYPNEHDK IRELSQQLAI EKKKVATYKR HLEMIFDHIE EHNESLAKKI 240 QSIVNNVKEM ESNEQLGQRH C*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.H01929.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012850619.1	0.0	PREDICTED: protein FAR1-RELATED SEQUENCE 5
TrEMBL	A0A022QCK4	0.0	A0A022QCK4_ERYGU; Uncharacterized protein
STRING	Migut.H01929.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA11568	23	25

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	1e-102	FAR1 family protein

Link Out ? help Back to Top
Phytozome	Migut.H01929.1.p
Entrez Gene	105970357