PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.H02023.1.p

Common Name

LOC105970314, MIMGU_mgv1a011141mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

DBB

Protein Properties

Length: 292aa MW: 31430 Da PI: 6.2334

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.H02023.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.3	1.1e-06	4	45	5	40
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 C+ + e++ fC ++ lC +C ++ H H++v Migut.H02023.1.p 4 QCNVCAAAEASVFCCADEAALCWSCDQNVHAAnklagkHQRV 45 7****99*******************667788888876 PP
2	zf-B_box	30.9	5.5e-10	53	95	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 +++kC+ ++e +fC +++ llC++C +++H + H+ Migut.H02023.1.p 53 QMPKCDVCQETAGYFFCVEDRALLCRKCDVAIHASnslasvHK 95 799*****99*******************7767777776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50119	10.182	1	47	IPR000315	B-box-type zinc finger
CDD	cd00021	4.64E-8	3	47	No hit	No description
SMART	SM00336	5.3E-9	4	47	IPR000315	B-box-type zinc finger
SMART	SM00336	2.1E-14	52	99	IPR000315	B-box-type zinc finger
PROSITE profile	PS50119	9.158	52	99	IPR000315	B-box-type zinc finger
Pfam	PF00643	1.5E-6	53	86	IPR000315	B-box-type zinc finger
CDD	cd00021	6.24E-8	55	99	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005622	Cellular Component	intracellular
GO:0008270	Molecular Function	zinc ion binding

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence Send to blast
MKIQCNVCAA AEASVFCCAD EAALCWSCDQ NVHAANKLAG KHQRVRLSSS STQMPKCDVC 60 QETAGYFFCV EDRALLCRKC DVAIHASNSL ASVHKRFLLT GVKVDLEATE PRKTSSLEKT 120 STTDCKTSEF EPPPTLSKRT SYQASVCGGN NNNNSSSSLK PPPLAGGSSS GSVPQWQLDE 180 FIGLGDFTTQ GYNFTNVASS KAENGNRGVS DCFEILRAGG DGELEGDENL GQVPSATFWA 240 VPEIPSLLPT SSALYSPKIY QNTLDSSVFV PDMDYHNNQS HIASSKRRRN F*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.H02023.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012850576.1	0.0	PREDICTED: B-box zinc finger protein 22-like
TrEMBL	A0A022QCA2	0.0	A0A022QCA2_ERYGU; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2892	23	46

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	8e-68	light-regulated zinc finger protein 1

Link Out ? help Back to Top
Phytozome	Migut.H02023.1.p
Entrez Gene	105970314