PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H02158.1.p
Common NameLOC105965076, MIMGU_mgv1a007030mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family G2-like
Protein Properties Length: 423aa    MW: 46937.9 Da    PI: 6.6619
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H02158.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like85.16.9e-27150204156
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                       kp+++Wt eLH+rFv++veqL G +kA+P++ilelm++++Lt+++++SHLQkYR++
  Migut.H02158.1.p 150 KPKVDWTAELHKRFVKVVEQL-GVDKAVPSRILELMGIDCLTRHNIASHLQKYRSH 204
                       79*******************.********************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.243147206IPR017930Myb domain
SuperFamilySSF466897.7E-18148207IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.8E-26148207IPR009057Homeodomain-like
TIGRFAMsTIGR015574.6E-25150204IPR006447Myb domain, plants
PfamPF002491.5E-7153202IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    Send to blast
MVAAVSNNNE REIQIPYDFL MEGINDDYPP DGFSNNFLDS IDFDELFMGI GDDDVLPDLE  60
TDQSHHHILV SDFSVTSNEC SDDSDTNNNN NNNNNNNNNN VGVSYTIASS SSNEMLGEED  120
QAPLSPETIK SKKSSSSAHH RSKNPTGKKK PKVDWTAELH KRFVKVVEQL GVDKAVPSRI  180
LELMGIDCLT RHNIASHLQK YRSHRKHLLA REAEAASWSQ RRQMYGTEKR SMVNNQLHPN  240
WNNIAPSYNT GFPPATPLMP PHLVRPLHVW GHPSIDQSLM HMWHKHPPPP PWQLAPHHPL  300
PPDPSFWHQY VQNAAGTPCS FPMHLPQTVI TKPSLKSPLI PAAPGKVVEA DLCIDGAGQK  360
LTQPPLSDVH PSKERIDAAI GDVIAKPWLP LPLGLKPPSM DSVIVELRRQ GIPKIPPSST  420
SP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A3e-17146202157ARR10-B
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H02158.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012845042.10.0PREDICTED: transcription activator GLK1-like
TrEMBLA0A022QQ070.0A0A022QQ07_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA25322356
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20570.16e-66GBF's pro-rich region-interacting factor 1