PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H02203.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 263aa    MW: 25902.7 Da    PI: 9.2367
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H02203.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.00041159179323
                       ETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                       C+ C k F ++  L  H+r+H
  Migut.H02203.1.p 159 CSVCAKEFMSPKALFGHMRSH 179
                       ********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576676.97E-5155181No hitNo description
PROSITE profilePS501579.265157179IPR007087Zinc finger, C2H2
PfamPF139122.3E-7158181IPR007087Zinc finger, C2H2
PROSITE patternPS000280159179IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MTTGGDNGGS SSSPNTIGES PSRRRNISGG GANASPPPPP PPPPASPPRL WPPVMGIPGV  60
SAFTPYNRNA PPPPPPTNPG VLYNPRPAGG AALFGFGGGL GFQGGQALAV GGGGSGAPAG  120
GARVGGSLAA RKRVRDGAAG GGVAGGRNPP EGAGNPVNCS VCAKEFMSPK ALFGHMRSHP  180
DRGWKGAHPP PSFRAEEEFA DLRGVNHRPA GGAAAAPAAA VEDGGNDAVV RAEAPPQEGG  240
AREDGGEEPP KRNYLLPDLN EG*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H02203.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012844875.11e-179PREDICTED: formin-like protein 5
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9281713
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35700.17e-11C2H2 family protein