PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.H02300.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

bHLH

Protein Properties

Length: 243aa MW: 26018.6 Da PI: 9.6292

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.H02300.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.1	6.5e-13	58	104	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h+e+ErrRR+riN +++L+++lP+ K +Ka+ L +Av+ +k+L Migut.H02300.1.p 58 NSHKEAERRRRKRINGHIATLKSILPNT-----IKTDKASLLGEAVKRVKEL 104 68***********************8.....69**********99988 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	15.18	55	104	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	2.0E-10	58	104	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	1.57E-12	59	112	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	6.8E-13	59	113	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.2E-10	61	110	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence Send to blast
MFSIPSLYEL GACSDNSYDN NNNNILQGVF TTPPPLTETH ETLSPGSTAE AKAAAASNSH 60 KEAERRRRKR INGHIATLKS ILPNTIKTDK ASLLGEAVKR VKELNKKTAE LTNGGEEEDN 120 GVKTAGAAGM LMIPSETDEL KVSRCEKTGL TKASLSCDDR AEIITEMITA VKAAEGKVVR 180 AEMSTVGGRT KSILWVKFGG ENDVGLGTLR RGLRMVMDKS TLLAGSGQGL PGNNKRARYY 240 HL*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.H02300.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012844971.1	1e-178	PREDICTED: transcription factor bHLH30-like
TrEMBL	A0A022QTQ3	1e-139	A0A022QTQ3_ERYGU; Uncharacterized protein
STRING	Migut.H02300.1.p	1e-177	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA7283	22	31

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	2e-30	bHLH family protein

Link Out ? help Back to Top
Phytozome	Migut.H02300.1.p