PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H02486.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GATA
Protein Properties Length: 232aa    MW: 24870 Da    PI: 10.3651
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H02486.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.69.5e-20162196135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       Cs+Cg+tkTp+WR gp g ktLCnaCG+++++ +l
  Migut.H02486.1.p 162 CSHCGVTKTPQWRAGPLGRKTLCNACGVRFKSGRL 196
                       *******************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0169928.2E-705231IPR016679Transcription factor, GATA, plant
PROSITE profilePS5011412.202156192IPR000679Zinc finger, GATA-type
SMARTSM004012.3E-15156210IPR000679Zinc finger, GATA-type
SuperFamilySSF577164.13E-15157219No hitNo description
Gene3DG3DSA:3.30.50.104.4E-15160194IPR013088Zinc finger, NHR/GATA-type
CDDcd002021.00E-13161209No hitNo description
PROSITE patternPS003440162187IPR000679Zinc finger, GATA-type
PfamPF003202.0E-17162196IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
APPPPPPENG ALSPELSVQA AEGLESLEWL SHFVEESFSD YPLTGKFPHN PTAARSEPPQ  60
AAAAKEQPCF TTPVQTKART KRARTGVRVW PVLSPSSFAE TSAASSSSSS SSTSFSPPAL  120
YFIQTETGDS SLRKPPAAKK RKSKPADVSG GGGAGQQQPR RCSHCGVTKT PQWRAGPLGR  180
KTLCNACGVR FKSGRLLPEY RPACSPTFST DLHSNSHRKV LEMRRKKELE N*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H02486.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012844956.11e-165PREDICTED: GATA transcription factor 5-like
SwissprotQ9FH578e-60GATA5_ARATH; GATA transcription factor 5
TrEMBLA0A022QX951e-124A0A022QX95_ERYGU; GATA transcription factor
STRINGMigut.H02486.1.p1e-166(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA11542481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.21e-40GATA transcription factor 5