PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.I00176.2.p

Common Name

MIMGU_mgv1a012184mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

MYB_related

Protein Properties

Length: 260aa MW: 28629.3 Da PI: 5.5865

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.I00176.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.4	5e-11	2	36	12	48
HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++++ ++lG++ W++Ia++++ Rt++++k++w+++l Migut.I00176.2.p 2 IIHLQALLGNR-WAAIASYLP-ERTDNDIKNYWNTHL 36 5788899**.*****.**********996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00717	5.8E-4	1	38	IPR001005	SANT/Myb domain
PROSITE profile	PS51294	19.927	1	40	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	1.6E-15	1	37	IPR009057	Homeodomain-like
CDD	cd00167	3.81E-8	1	36	No hit	No description
Pfam	PF00249	1.2E-9	2	36	IPR001005	SANT/Myb domain
SuperFamily	SSF46689	5.07E-10	2	46	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence Send to blast
MIIHLQALLG NRWAAIASYL PERTDNDIKN YWNTHLKKKL EKQNHHTQNG NHNNSSSSSS 60 SSEHSKSNSK GQWERRLQTD IHTAKQALCD ALSLDKSGPT ISPIDTKLFN VVPQVQTSTY 120 ASSTENIARL LEKWIKKPSN DSSQSASSES TTPSTSFSNN IINNNNNNKN ASVGLISSPS 180 EGAVSTTFLS FNSTNSDFTQ SEYEGKFENG IFRDGSKDNI LETQMPFSLL EKWLLDDAAA 240 QGQDGDFMDM DLVGTADLF*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor. {ECO:0000305}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.I00176.2.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012839369.1	0.0	PREDICTED: myb-related protein 306
Swissprot	P81392	9e-78	MYB06_ANTMA; Myb-related protein 306
TrEMBL	A0A022RA95	0.0	A0A022RA95_ERYGU; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47600.1	2e-38	myb domain protein 94

Link Out ? help Back to Top
Phytozome	Migut.I00176.2.p

Publications ? help Back to Top
Jackson D,Culianez-Macia F,Prescott AG,Roberts K,Martin C Expression patterns of myb genes from Antirrhinum flowers. Plant Cell, 1991. 3(2): p. 115-25 [PMID:1840903]