PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.I00182.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

Nin-like

Protein Properties

Length: 370aa MW: 42174.8 Da PI: 4.8415

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.I00182.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	83.2	2.5e-26	192	242	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +k +s e++s+yF++pi++AA+eL+v+lT+LK++CR++GI+RWPhRk+ sl Migut.I00182.1.p 192 KKLLSRETVSQYFYMPITQAARELNVGLTLLKKRCRELGIRRWPHRKLMSL 242 677999******************************************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.461	173	262	IPR003035	RWP-RK domain
Pfam	PF02042	3.6E-21	195	242	IPR003035	RWP-RK domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0051302	Biological Process	regulation of cell division

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence Send to blast
MEAATKAWSN SYCHVITKEE EVYNNSFPSS QLPPLDFSTS GFSGGGGGLN GWEFQQRSGM 60 AFMQDQEDSL FDDTVPHLSD MLQTDPFFSP LHLSDNLNLI PEVYFCNAGG WNEAWTEFQG 120 ATDQLVQLPH NDQNIIFDNN VHHQEILVVE NHENINNNKQ VLVQSSTNNI ISTTRKEEQE 180 DQVEVNNSGS SKKLLSRETV SQYFYMPITQ AARELNVGLT LLKKRCRELG IRRWPHRKLM 240 SLQTLIKNVQ ENGEEGETTK LKGSLETLVQ EKKLMEEIPD MQLEDKTKRL RQSFFKANYK 300 KRKLMGMVSN DSNSRRCRVK YSSSSKEDNR SGGVKSSDGY GGDFNYDEDD EFMYFFSDCF 360 SSSSSDIIF*

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence Send to blast

MEAATKAWSN SYCHVITKEE EVYNNSFPSS QLPPLDFSTS GFSGGGGGLN GWEFQQRSGM  60
AFMQDQEDSL FDDTVPHLSD MLQTDPFFSP LHLSDNLNLI PEVYFCNAGG WNEAWTEFQG  120
ATDQLVQLPH NDQNIIFDNN VHHQEILVVE NHENINNNKQ VLVQSSTNNI ISTTRKEEQE  180
DQVEVNNSGS SKKLLSRETV SQYFYMPITQ AARELNVGLT LLKKRCRELG IRRWPHRKLM  240
SLQTLIKNVQ ENGEEGETTK LKGSLETLVQ EKKLMEEIPD MQLEDKTKRL RQSFFKANYK  300
KRKLMGMVSN DSNSRRCRVK YSSSSKEDNR SGGVKSSDGY GGDFNYDEDD EFMYFFSDCF  360
SSSSSDIIF*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.I00182.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012839264.1	0.0	PREDICTED: protein RKD1
STRING	Migut.I00182.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4274	21	42

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18790.1	5e-51	RWP-RK domain-containing protein

Link Out ? help Back to Top
Phytozome	Migut.I00182.1.p