PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.I00253.1.p

Common Name

MIMGU_mgv1a025696mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

C2H2

Protein Properties

Length: 144aa MW: 17021.3 Da PI: 7.9182

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.I00253.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.4	5.2e-05	107	130	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y+C++C+k+F+ +L +H + H Migut.I00253.1.p 107 YRCGYCKKVFRAEIYLDQHFDNrH 130 9***************99976666 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50157	8.725	107	130	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	109	130	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 144 aa Download sequence Send to blast
MANRRIGKTI PCSAFSVFIL LLSSATSQSQ PNQGIDIDPS RNIKEQHPEV HCSRERSRAA 60 WKIIEEYLIP FMEKEKYQLS SRCRLHQSND IFREQEEHKI HVDINEYRCG YCKKVFRAEI 120 YLDQHFDNRH YNLLNVLLEP QGW*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.I00253.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012854614.1	2e-95	PREDICTED: uncharacterized protein LOC105974100
TrEMBL	A0A022RK54	6e-97	A0A022RK54_ERYGU; Uncharacterized protein (Fragment)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA8084	12	16

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63280.1	4e-42	C2H2-like zinc finger protein

Link Out ? help Back to Top
Phytozome	Migut.I00253.1.p