PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.I00264.1.p
Common NameLOC105955050, MIMGU_mgv1a004366mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C3H
Protein Properties Length: 532aa    MW: 59246.4 Da    PI: 4.7636
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.I00264.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH35.81.4e-11211234427
                       ---SGGGGTS--TTTTT-SS-SSS CS
           zf-CCCH   4 elCrffartGtCkyGdrCkFaHgp 27 
                       e C f++++G Ck+G +CkF+H+p
  Migut.I00264.1.p 211 EDCAFYMKFGSCKFGTNCKFNHPP 234
                       89********************97 PP
2zf-CCCH39.11.3e-12302327227
                       -S---SGGGGTS--TTTTT-SS-SSS CS
           zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHgp 27 
                       ++++C++++rtG CkyG++C+F+H++
  Migut.I00264.1.p 302 GEKECPYYLRTGSCKYGSNCRFHHPE 327
                       7899********************96 PP
3zf-CCCH19.81.4e-06427453127
                       --S---SGGGGTS--TTTTT-SS-SSS CS
           zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                       +++++C+ff +tG Ck+  +CkF+H++
  Migut.I00264.1.p 427 PGEPECSFFIKTGDCKFKFNCKFNHPK 453
                       5799*********************96 PP
4zf-CCCH34.43.7e-11474499227
                       -S---SGGGGTS--TTTTT-SS-SSS CS
           zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHgp 27 
                       ++++C +++r+G+CkyG+ Ck+ H++
  Migut.I00264.1.p 474 DQPICTHYHRYGICKYGPACKYDHSM 499
                       689*********************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5010315.187207235IPR000571Zinc finger, CCCH-type
SuperFamilySSF902291.03E-5207234IPR000571Zinc finger, CCCH-type
SMARTSM003567.6E-5207234IPR000571Zinc finger, CCCH-type
PfamPF006421.1E-8211234IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010312.183254282IPR000571Zinc finger, CCCH-type
SMARTSM003561.5254281IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010316.877300328IPR000571Zinc finger, CCCH-type
SMARTSM003569.5E-7300327IPR000571Zinc finger, CCCH-type
PfamPF006423.0E-10302327IPR000571Zinc finger, CCCH-type
SuperFamilySSF902294.58E-7302329IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.107.1E-6306326IPR000571Zinc finger, CCCH-type
SMARTSM003560.27426453IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010312.558426454IPR000571Zinc finger, CCCH-type
SMARTSM003563.6E-5472499IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010314.446472500IPR000571Zinc finger, CCCH-type
PfamPF006422.2E-8474498IPR000571Zinc finger, CCCH-type
SuperFamilySSF902296.28E-6474500IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.105.4E-4477498IPR000571Zinc finger, CCCH-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 532 aa     Download sequence    Send to blast
MAETSTSDKP PIQKLGLGLL IPDAAPFDPT TTAADDQPNA SDSVSDPPPQ AAAKAVNVMD  60
EEISTTSEEA ELELGISLEK ELFQLAIFQA EMEAASMRLE AIDAEEEEEN GFRTVETENF  120
DEGENGKDSE RVEEANEGYD EGNAMKMAEI DYLVEENNEN DAEIFEEENE NGGSENDREE  180
VGFGEGVEKL ARPNHSLNRR KINYPTRPDA EDCAFYMKFG SCKFGTNCKF NHPPRRKYQG  240
VKERANHREE NSEKAGQTEC KYHFTSVGCR YGKDCKYSHG PMKSSTFHNP AFNFLGLPIR  300
PGEKECPYYL RTGSCKYGSN CRFHHPEPKT VPVGGGSPSG YDNGSSWSSP RALTNTSPFV  360
PVMFPLNQGT STPNQEWNNG YQGTTYPTSE RSLPTPPAFA INNLPTEINF PMPQQHGMAV  420
EEYPERPGEP ECSFFIKTGD CKFKFNCKFN HPKNRNPRPN SFSLNDQGLP LRPDQPICTH  480
YHRYGICKYG PACKYDHSMG PSPPPFVQPP AFDRGQILGA FDRGRISGLR K*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.I00264.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012834203.10.0PREDICTED: zinc finger CCCH domain-containing protein 67
TrEMBLA0A022RK450.0A0A022RK45_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA44682343
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48440.11e-112C3H family protein