PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.I00287.1.p
Common NameMIMGU_mgv1a017839mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 199aa    MW: 23295.9 Da    PI: 9.9265
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.I00287.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM58.72e-1881458128
               NAM   8 hPtdeelvveyLkkkvegkkleleev.ikevdiy..kvePwdLpk.......kvkaeekew.yfFskrdkkyatgkrknratksgyWkatgkd 89 
                        P+deel+++yL k+++g  ++l    ++e +iy  +++Pw+  +       + +++ k++ y  +k  +  + ++r  r tksg+Wk + + 
  Migut.I00287.1.p   8 VPSDEELINCYLLKQIHGMGIPLPWNwMSEKEIYgeTADPWEVLQdvhwedfHSETKFKHVtYVLTKLLR-VNGKTRIARRTKSGTWKGQTSG 99 
                       6*******************888555599999994346****9643566644222333344244444444.4567899999************ PP

               NAM  90 kevlsk.kgelvglkktLvfy......kgrapkgektdWvmheyrl 128
                       ke++++ +g+l+gl k+++fy      +  +++ e+ +W+m+e++l
  Migut.I00287.1.p 100 KEIYDEsSGNLIGLSKMFTFYknkpkgRSGEEEEEHGHWIMQEFSL 145
                       ****9978889**********6665332334455799*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100521.6311167IPR003441NAC domain
PfamPF023651.1E-128145IPR003441NAC domain
SuperFamilySSF1019414.71E-208165IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MRIAPGVVPS DEELINCYLL KQIHGMGIPL PWNWMSEKEI YGETADPWEV LQDVHWEDFH  60
SETKFKHVTY VLTKLLRVNG KTRIARRTKS GTWKGQTSGK EIYDESSGNL IGLSKMFTFY  120
KNKPKGRSGE EEEEHGHWIM QEFSLAGVCL NFELKFKDYA ICRITRIITW MFPKENLKEK  180
TKKQPKESKK IVRNRRRS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.I00287.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012834172.11e-117PREDICTED: protein CUP-SHAPED COTYLEDON 3-like
TrEMBLA0A022RK211e-145A0A022RK21_ERYGU; Uncharacterized protein
STRINGMigut.I00287.1.p1e-146(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.13e-12NAC domain containing protein 83