PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.I00295.1.p
Common NameMIMGU_mgv1a025009mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 238aa    MW: 27728.6 Da    PI: 7.5021
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.I00295.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM58.32.7e-1881418128
               NAM   8 hPtdeelvveyLkkkvegkkleleevikevdiy..kvePwdLpk.......kvkaeekew.yfFskrdkkyatgkrknratksgyWkatgkdk 90 
                        P+deel+++yL k   g +l+  + ++e +iy  +++Pw+  +       + +++ k++ y  +k  +  + ++r  r tksg+Wk + + k
  Migut.I00295.1.p   8 VPSDEELINCYLLKVSMGIPLPW-NWMSEKEIYgeTTDPWEVLQdvhwedfHSETKFKHVtYVLTKLLR-VNGKTRIARRTKSGTWKGQTSGK 98 
                       6*******************999.7899999984458****9643566644222333344244444444.4567899999************* PP

               NAM  91 evlsk.kgelvglkktLvfy....kgrapkgektdWvmheyrl 128
                       e++++ +g+l+gl k+++fy    kgr+ + e+ +W+m+e++l
  Migut.I00295.1.p  99 EIYDEsSGNLIGLSKMFTFYknkpKGRSGEEEHGHWIMQEFSL 141
                       ***9978889**********7766688888899********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100521.3251163IPR003441NAC domain
SuperFamilySSF1019412.48E-218161IPR003441NAC domain
PfamPF023651.5E-118141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MRIAPGVVPS DEELINCYLL KVSMGIPLPW NWMSEKEIYG ETTDPWEVLQ DVHWEDFHSE  60
TKFKHVTYVL TKLLRVNGKT RIARRTKSGT WKGQTSGKEI YDESSGNLIG LSKMFTFYKN  120
KPKGRSGEEE HGHWIMQEFS LAGVCLNFEL KFKDYAICRI TRILKITQFV ESLGCFQRKT  180
KRKRQRSSRR LAEDEGIEED RDAFSKMQKI DLDNIEFDFD IDIDDITLKD SDGVRRN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1176183QRKTKRKR
2180185KRKRQR
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.I00295.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012841536.11e-120PREDICTED: protein CUP-SHAPED COTYLEDON 3-like isoform X1
RefseqXP_012841537.11e-120PREDICTED: protein CUP-SHAPED COTYLEDON 3-like isoform X2
TrEMBLA0A022QZV81e-176A0A022QZV8_ERYGU; Uncharacterized protein
STRINGMigut.I00295.1.p1e-176(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.19e-13NAC domain containing protein 83