PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.I00320.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 191aa    MW: 21437.2 Da    PI: 8.1853
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.I00320.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM67.92.9e-21231593128
               NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev...ikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgy..Wk 84 
                        G rF+Ptdeel+  yL+ k ++ +l++ ev   i+ +  ++ +P +L k      k +a++kew+fF+  d+  + +  k r++ +g+  W+
  Migut.I00320.1.p  23 IGWRFKPTDEELL-SYLAMKSASGSLPF-EVipeIPAASFFDDHPMNLVKnqtkdnKGSASDKEWHFFIDGDEYFEGEIVKDRKVGQGIgsWR 113
                       69***********.9******9999877.44023666678999*****743455544444888********99888888899987755444** PP

               NAM  85 atgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                       + gk+ +v+ ++g+++g k   +++   ++++++++t W m  yrl
  Migut.I00320.1.p 114 SVGKEDAVIGQDGKVIGYKYLSTYFttAENSSRPKQTLWEMRKYRL 159
                       *******************9999995445777889*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100525.35821182IPR003441NAC domain
SuperFamilySSF1019412.62E-2222181IPR003441NAC domain
PfamPF023651.5E-1124159IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MNNPSESAKE AVLRRFLLGE SLIGWRFKPT DEELLSYLAM KSASGSLPFE VIPEIPAASF  60
FDDHPMNLVK NQTKDNKGSA SDKEWHFFID GDEYFEGEIV KDRKVGQGIG SWRSVGKEDA  120
VIGQDGKVIG YKYLSTYFTT AENSSRPKQT LWEMRKYRLS AEQVNNLSAP VKRCVAARIS  180
RRDTKASCID *
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.I00320.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012830406.11e-141PREDICTED: NAC domain-containing protein 55-like
STRINGMigut.I00320.1.p1e-140(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1616666
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14000.14e-14NAC domain containing protein 84