PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.I00464.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

Trihelix

Protein Properties

Length: 96aa MW: 11116.6 Da PI: 8.2437

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.I00464.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	35.8	2.1e-11	5	67	2	63
trihelix 2 WtkqevlaLiearremeerlr.rgklkkplWeevskkmrergferspkqCkekwenlnkrykk 63 W v +L ++ +m e+++ +++l+ +Wee+sk +++g + sp+qCk+k+++++ + + Migut.I00464.1.p 5 WNIPDVSTLFQLCHKMVEDSGlQENLRHLRWEEISKSFHDKGSTFSPQQCKDKFDKIRSTWLA 67 8888899999999998888874689*******************************9987554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	5.1E-9	4	67	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 96 aa Download sequence Send to blast
MPAHWNIPDV STLFQLCHKM VEDSGLQENL RHLRWEEISK SFHDKGSTFS PQQCKDKFDK 60 IRSTWLAFYK KRAKVGRESY GLEIDDNTGM LIGGW*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.I00464.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012834209.1	5e-64	PREDICTED: uncharacterized protein LOC105955056 isoform X1
Refseq	XP_012834210.1	5e-64	PREDICTED: uncharacterized protein LOC105955056 isoform X1
Refseq	XP_012834211.1	3e-64	PREDICTED: uncharacterized protein LOC105955056 isoform X2
STRING	Migut.I00464.1.p	1e-66	(Erythranthe guttata)

Link Out ? help Back to Top
Phytozome	Migut.I00464.1.p