PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.I00469.1.p
Common NameMIMGU_mgv1a024959mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 151aa    MW: 17816.3 Da    PI: 7.0739
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.I00469.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM62.41.4e-1941412127
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeek..ewyfFskrdkkyatgkrknratksgyWkatg 87 
                       +pG+rF P+deel+++yL k   g   +  + i+e diy  +Pw+  +      +++e+k  ++ +  ++  + + ++r  r tksg+Wk + 
  Migut.I00469.1.p   4 APGYRFLPSDEELINCYLLKASMGILPPW-NRIPEKDIYG-DPWEVLQdvhwdDFHSEKKfkHVMYVLTQLLRVNGKTRIGRRTKSGTWKGQT 94 
                       69******************999999888.77******96.899985435676333333342443333444444557899999********** PP

               NAM  88 kdkevlsk.kgelvglkktLvfy......kgrapkgektdWvmheyr 127
                       + ke++++  g+l+gl k+++fy      +  +++ e+ +W+++ey+
  Migut.I00469.1.p  95 SGKEIYDEsWGNLIGLSKMFTFYenkpkgSSGKEEEEHGHWTIKEYQ 141
                       ******9877889**********6655442234444799*******7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.4793151IPR003441NAC domain
SuperFamilySSF1019414.97E-213141IPR003441NAC domain
PfamPF023652.6E-145141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    Send to blast
MRIAPGYRFL PSDEELINCY LLKASMGILP PWNRIPEKDI YGDPWEVLQD VHWDDFHSEK  60
KFKHVMYVLT QLLRVNGKTR IGRRTKSGTW KGQTSGKEIY DESWGNLIGL SKMFTFYENK  120
PKGSSGKEEE EHGHWTIKEY QELLRMSEVF D
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.I00469.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012853158.11e-78PREDICTED: protein CUP-SHAPED COTYLEDON 3-like
RefseqXP_012854544.12e-77PREDICTED: NAC transcription factor 29-like isoform X1
RefseqXP_012854545.11e-77PREDICTED: NAC transcription factor 29-like isoform X2
RefseqXP_012854546.11e-77PREDICTED: NAC transcription factor 29-like isoform X3
TrEMBLA0A022Q5B61e-108A0A022Q5B6_ERYGU; Uncharacterized protein
STRINGMigut.I00469.1.p1e-109(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.22e-13NAC domain containing protein 41