PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.I00471.1.p
Common NameLOC105974021, MIMGU_mgv1a021471mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 300aa    MW: 34886.3 Da    PI: 4.5103
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.I00471.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM72.51.1e-2241442128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk.......kvkaeek..ew.yfFskrdkkyatgkrknratksgyW 83 
                       +pG+rF P+deel+++yL k+  g kl+  + ++++diy   +Pw+  +       +  +e+k  ++ y  +k  +  + ++r  r tksg+W
  Migut.I00471.1.p   4 APGYRFLPSDEELINCYLLKESMGIKLPW-NPMSKTDIYGQkDPWEVLQdvhwddfH--SENKfkHVtYVLTKLLR-VNGKTRIARRTKSGTW 92 
                       69**************************9.88******96559***96445676432..33333244244444444.4567899999****** PP

               NAM  84 katgkdkevlsk.kgelvglkktLvfy.......kgrapkgektdWvmheyrl 128
                       k + + ke++++ +g+l+gl k+++fy       +  +++ e+ +W+mhe++l
  Migut.I00471.1.p  93 KGQTSGKEIYDEsSGKLIGLSKMFTFYknkpkggS-GEEEEEHGHWIMHEFSL 144
                       **********9978899**********54443222.33444699*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100527.5723166IPR003441NAC domain
SuperFamilySSF1019416.28E-263164IPR003441NAC domain
PfamPF023656.3E-165144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MRIAPGYRFL PSDEELINCY LLKESMGIKL PWNPMSKTDI YGQKDPWEVL QDVHWDDFHS  60
ENKFKHVTYV LTKLLRVNGK TRIARRTKSG TWKGQTSGKE IYDESSGKLI GLSKMFTFYK  120
NKPKGGSGEE EEEHGHWIMH EFSLAGVSLN FELKFKDYAI CRITRIFPKE NDKEKTKKQP  180
KIIVPQELNP VLDEEDQLLA DELQQAMYSD EQIIVPQEQN PITDEDNQLL EDEIERAVYS  240
DEDRLLGMPN IGKKRLAEDE GIEEDRDEFS KMQKIDLDNI EFDFDIDIDD ISLKDLGWS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A7e-12117513174Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.I00471.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012854515.10.0PREDICTED: NAC transcription factor 29-like
TrEMBLA0A022Q6A60.0A0A022Q6A6_ERYGU; Uncharacterized protein
STRINGMigut.I00471.1.p0.0(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.17e-16NAC domain containing protein 83