PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.I00669.1.p
Common NameLOC105976087, MIMGU_mgv1a007513mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family LFY
Protein Properties Length: 406aa    MW: 45227.8 Da    PI: 6.2994
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.I00669.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY6503.3e-19813871385
           FLO_LFY   1 mdpeafsaslfkwdpraaaaapparlleeaavseap.leaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmks 92 
                       mdp+afsaslfkwdpr a+ +p++rlle    +++p  ++a ++  r+l +leelf+ayG+ry+t+akiaelGftv+tL+dm+deel+++m+s
  Migut.I00669.1.p   1 MDPDAFSASLFKWDPRGAM-PPTNRLLEAVLPPPPPpPSSAYSVRPRELGGLEELFQAYGIRYYTAAKIAELGFTVNTLLDMRDEELEEMMNS 92 
                       9**************9876.788888877776665534455555666688******************************************* PP

           FLO_LFY  93 lseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeet..aldalsqeglseepvqe.ekeaagsggeglgeaelvaaeekkse 182
                       l++ifr+dllvGeryGikaavraerrrl++ee  ++rr+ll  d +t  aldalsqeglseepvq+ ekeaagsgg+g   +e+v+a+  +++
  Migut.I00669.1.p  93 LCQIFRWDLLVGERYGIKAAVRAERRRLDDEE--ARRRHLLCGDATThhALDALSQEGLSEEPVQQqEKEAAGSGGGG--VWEMVVAAGGRKQ 181
                       ******************************88..788888866655445**************999567788888887..8999988876666 PP

           FLO_LFY 183 eekkkaskkkqkrkkkkelkseededeeeeededeeg....sgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiak 271
                       ++++k+ + +++   + +   ++d+de+e  ++de +    +g +g+erqrehPfivtepgevargkknGLDYLf+LyeqCrefL+qvq+iak
  Migut.I00669.1.p 182 QRRRKNCRGRSRMAASMDDDDDDDDDETEGAEDDE-NcgggGGGGGSERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAK 273
                       66666655555555544433333333322222222.23444666778********************************************** PP

           FLO_LFY 272 erGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahpr 364
                       erGekcPtkvtnqvfryakkaga+yinkPkmrhYvhCYalhcLde++snalrrafkergenvGawrqacykplvaiaarqgwdida+fnahpr
  Migut.I00669.1.p 274 ERGEKCPTKVTNQVFRYAKKAGANYINKPKMRHYVHCYALHCLDEDTSNALRRAFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPR 366
                       ********************************************************************************************* PP

           FLO_LFY 365 LsiWYvPtkLrqLChlerska 385
                       LsiWYvPtkLrqLCh+ers a
  Migut.I00669.1.p 367 LSIWYVPTKLRQLCHAERSCA 387
                       ******************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF016986.3E-2111387IPR002910Floricaula/leafy protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010077Biological Processmaintenance of inflorescence meristem identity
GO:0010582Biological Processfloral meristem determinacy
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0031490Molecular Functionchromatin DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    Send to blast
MDPDAFSASL FKWDPRGAMP PTNRLLEAVL PPPPPPPSSA YSVRPRELGG LEELFQAYGI  60
RYYTAAKIAE LGFTVNTLLD MRDEELEEMM NSLCQIFRWD LLVGERYGIK AAVRAERRRL  120
DDEEARRRHL LCGDATTHHA LDALSQEGLS EEPVQQQEKE AAGSGGGGVW EMVVAAGGRK  180
QQRRRKNCRG RSRMAASMDD DDDDDDDETE GAEDDENCGG GGGGGGSERQ REHPFIVTEP  240
GEVARGKKNG LDYLFHLYEQ CREFLIQVQN IAKERGEKCP TKVTNQVFRY AKKAGANYIN  300
KPKMRHYVHC YALHCLDEDT SNALRRAFKE RGENVGAWRQ ACYKPLVAIA ARQGWDIDAI  360
FNAHPRLSIW YVPTKLRQLC HAERSCAAAA ASTSISGGGV DHLPF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2vy1_A1e-1082264052194PROTEIN LEAFY
2vy2_A1e-1082264052194PROTEIN LEAFY
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtRequired for flower development. FLO may interact in a sequential manner with other homeotic genes affecting floral organ identity.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00095SELEXTransfer from AT5G61850Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.I00669.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY5240360.0AY524036.1 Mimulus guttatus floricaula (FLO) mRNA, FLOA paralog, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012856831.10.0PREDICTED: floricaula protein-like
SwissprotP239150.0FLO_ANTMA; Floricaula protein
TrEMBLA0A022Q1S40.0A0A022Q1S4_ERYGU; Uncharacterized protein
STRINGMigut.I00669.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA66682333
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-150floral meristem identity control protein LEAFY (LFY)
Publications ? help Back to Top
  1. Coen ES, et al.
    floricaula: a homeotic gene required for flower development in antirrhinum majus.
    Cell, 1990. 63(6): p. 1311-22
    [PMID:1702033]
  2. Aagaard JE,Olmstead RG,Willis JH,Phillips PC
    Duplication of floral regulatory genes in the Lamiales.
    Am. J. Bot., 2005. 92(8): p. 1284-93
    [PMID:21646149]