PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.I00713.1.p
Common NameLOC105975505, MIMGU_mgv1a012564mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 247aa    MW: 25930.1 Da    PI: 10.2907
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.I00713.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.50.000116991123
                      EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                      ++C++C++ F ++  L  H++ H
  Migut.I00713.1.p 69 FSCNYCNRKFYSSQALGGHQNAH 91
                      89*****************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576676.83E-76696No hitNo description
PROSITE profilePS5015711.7186996IPR007087Zinc finger, C2H2
PROSITE patternPS0002807191IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009640Biological Processphotomorphogenesis
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MEAQSSLQPC SIQEHGRKIK NRDIVLDLSL SGKDNSDQIS KAPELELISL FHANPDQIPA  60
KESPENRVFS CNYCNRKFYS SQALGGHQNA HKRERTIARK GQRIGGAGHH DAAAAAHHRY  120
SSMASLPLHG SFNGRAALGI QVHSMIHKQP PSFSGGGGGG GGGGMMLPSL YRQAAVGRLV  180
VENQNHQVGP SAAASGGAAR FDGGWRFSAA VDGVGGGGGG GFRWDAVKKS SGKSEDLKKL  240
DLSLKL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.I00713.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012856157.11e-180PREDICTED: zinc finger protein 1
TrEMBLA0A022Q3A71e-179A0A022Q3A7_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA58272233
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.15e-32zinc-finger protein 1