PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.I01007.1.p

Common Name

LOC105975555, MIMGU_mgv1a020718mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

Dof

Protein Properties

Length: 244aa MW: 25466.4 Da PI: 6.0708

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.I01007.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.8	6.6e-40	23	83	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++lkcprCds+ntkfCyynny+lsqPr+fCk+C+ryWtkGGalrn+PvGgg+rkn k+s Migut.I01007.1.p 23 EQEHLKCPRCDSANTKFCYYNNYNLSQPRHFCKSCKRYWTKGGALRNIPVGGGSRKNAKRS 83 57899****************************************************9886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	1.3E-33	25	81	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.161	27	81	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	8.0E-23	27	75	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	29	65	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0010200	Biological Process	response to chitin
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence Send to blast
MQDPSLYSQI NAQAHQPQPQ FPEQEHLKCP RCDSANTKFC YYNNYNLSQP RHFCKSCKRY 60 WTKGGALRNI PVGGGSRKNA KRSSSSSATP SSSAAANKRP ATSAPETSSN DQNKDHGESN 120 TEAVLPPKGE NFVGQFGNFL EASGSFSSLL GSSGGQFGNF LEGLGPNGSG LQMNDHFGDQ 180 GSGQNMDPHV LDSGGGDHNA DDGFLNIHGG DGGGDGGGGE TGWSGGSNGW PDLAIYTPGS 240 TFL*

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00199	DAP	Transfer from AT1G51700	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.I01007.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012856207.1	1e-178	PREDICTED: dof zinc finger protein DOF3.1
TrEMBL	A0A022Q0V1	1e-177	A0A022Q0V1_ERYGU; Uncharacterized protein
STRING	Migut.I01007.1.p	1e-178	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21270.1	2e-31	DOF zinc finger protein 2

Link Out ? help Back to Top
Phytozome	Migut.I01007.1.p
Entrez Gene	105975555