PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.I01072.1.p
Common NameLOC105976015, MIMGU_mgv1a020950mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 208aa    MW: 23736.4 Da    PI: 8.6401
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.I01072.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.41.4e-172067148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT+eE  +l++av+ +G + W tI ++ g++R++k+c++rw +yl
  Migut.I01072.1.p 20 RGAWTPEENRKLAEAVTIHGAKEWPTIVSKAGLNRCAKSCRLRWMNYL 67
                      89********************************************97 PP
2Myb_DNA-binding52.79.8e-1773117147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg+++ +E++l+++++k+lG++ W++Ia++++ gRt++++k++w+ +
  Migut.I01072.1.p  73 RGNMSDQEEDLIIRLHKLLGNR-WSLIAARLP-GRTDNEIKNYWNCH 117
                       899*******************.*********.***********977 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.6511567IPR017930Myb domain
SuperFamilySSF466894.59E-2818114IPR009057Homeodomain-like
SMARTSM007175.0E-131969IPR001005SANT/Myb domain
PfamPF002497.3E-152067IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.3E-222174IPR009057Homeodomain-like
CDDcd001671.01E-82267No hitNo description
PROSITE profilePS5129425.30768122IPR017930Myb domain
SMARTSM007171.2E-1672120IPR001005SANT/Myb domain
PfamPF002495.7E-1573115IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.9E-2475121IPR009057Homeodomain-like
CDDcd001677.73E-1175118No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MARRKGDDGS IRKKQQELNR GAWTPEENRK LAEAVTIHGA KEWPTIVSKA GLNRCAKSCR  60
LRWMNYLRPN IKRGNMSDQE EDLIIRLHKL LGNRWSLIAA RLPGRTDNEI KNYWNCHLSK  120
KKSEEEALVA GISMGSKSGQ RFIGEEENNN NNSNNNNNNN RASCSSGVEV SSEEEQKTRF  180
DVNDFFDFSN ENPSTLEWVT KFIEFGE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A2e-27171214107B-MYB
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtRegulates the production of a signal that induces hair (trichome) precursor cells on leaf primordia to differentiate. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.I01072.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012856748.11e-151PREDICTED: transcription factor MYB114-like
SwissprotQ947R44e-50GL1_ARALY; Trichome differentiation protein GL1
TrEMBLA0A022Q0M51e-150A0A022Q0M5_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G40330.15e-52myb domain protein 23