PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.J00203.1.p

Common Name

MIMGU_mgv1a022546mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

MYB_related

Protein Properties

Length: 182aa MW: 20419.7 Da PI: 10.143

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.J00203.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.2	9.2e-09	7	43	11	47
HHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 11 llvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky Migut.J00203.1.p 7 QFLLGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKY 43 577899******************************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	13.279	1	48	IPR017930	Myb domain
SuperFamily	SSF46689	2.11E-10	6	47	IPR009057	Homeodomain-like
CDD	cd00167	1.73E-6	6	44	No hit	No description
TIGRFAMs	TIGR01557	3.0E-11	6	47	IPR006447	Myb domain, plants
Pfam	PF00249	2.8E-6	7	43	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	1.2E-6	7	43	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 182 aa Download sequence Send to blast
FSRFFRQFLL GLKKYGKGDW RNISRNFVTT RTPTQVASHA QKYFIRQLSG GKDKRRSSIH 60 DITTVNLDHE ANASSSSPEK DGPHSPEKSN FTLQPPHQHS LDGDIVVRAT YDSCLRNNNS 120 GEMMGFSSNC PQNGSLMITH LQGSSSFGIN LHEHDMHRID PHGLRLGHHG TVFQMHSTRH 180 S*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.J00203.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012832136.1	1e-133	PREDICTED: transcription factor DIVARICATA-like, partial
TrEMBL	A0A022RP75	1e-126	A0A022RP75_ERYGU; Uncharacterized protein (Fragment)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA16449	5	5

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58900.1	2e-38	Homeodomain-like transcriptional regulator

Link Out ? help Back to Top
Phytozome	Migut.J00203.1.p