PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J00300.1.p
Common NameMIMGU_mgv1a021043mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 169aa    MW: 18677.4 Da    PI: 4.3972
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J00300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.50.00012042123
                      EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                      y+C+ C + Fs+   L  H++ H
  Migut.J00300.1.p 20 YSCSFCRRGFSNAQALGGHMNIH 42
                      99*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.06E-61846No hitNo description
Gene3DG3DSA:3.30.160.606.5E-42044IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015711.3652047IPR007087Zinc finger, C2H2
PROSITE patternPS0002802242IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    Send to blast
MDNNPSSGGE TTNNITTTSY SCSFCRRGFS NAQALGGHMN IHRRDRAKLM MIDGDDEFSR  60
QNPPSKIGTE DGDEYSNKLI FNNQSTTNDD DDEIIIVVED NSIHRSLPLF TEQTVAAAPP  120
AETNGSNQEK AKTEKLRLIV GEDDDQLLDL ELRLGPIQPN QYSKSKQL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J00300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831751.11e-123PREDICTED: transcriptional regulator TAC1-like
TrEMBLA0A022RP351e-121A0A022RP35_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA74631626
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.19e-15C2H2 family protein