PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.J00521.1.p

Common Name

MIMGU_mgv1a013098mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

TCP

Protein Properties

Length: 232aa MW: 24312.4 Da PI: 9.4295

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.J00521.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	115.6	6.4e-36	68	153	4	87
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsss 87 + +++ ++hTkv+gR+RRvR++a+caar+F+L++eLG+ +d++tieWLl+ a+p+i+++tgt++ +a+++ +++s +ss s++++ Migut.J00521.1.p 68 ASSSSRDRHTKVNGRGRRVRMPALCAARVFQLTRELGHRSDGETIEWLLRHAEPSIIAATGTGTVPAEAVstSSGSVVSSRSADTA 153 567899********************************************************999997774333333333332222 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	1.0E-30	71	152	IPR005333	Transcription factor, TCP
PROSITE profile	PS51369	26.676	72	126	IPR017887	Transcription factor TCP subgroup

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0007623	Biological Process	circadian rhythm

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence Send to blast
MSSSDMVLHK TSSSLPPNFH HLHPPPISAV PHPVTPTSAD VTVAVSAGAR NSRPKIAVSR 60 KAVGGPAASS SSRDRHTKVN GRGRRVRMPA LCAARVFQLT RELGHRSDGE TIEWLLRHAE 120 PSIIAATGTG TVPAEAVSTS SGSVVSSRSA DTATMAAAHT VSSVSGSGVL TFVPPPPPSC 180 RLDLFQPPPT ELAFLPNGYR HMPFTTLLLQ PATAEEEAEE ERHRGVGGDH H*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.J00521.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012840942.1	1e-164	PREDICTED: transcription factor TCP11-like
Swissprot	Q9SJK7	2e-38	TCP11_ARATH; Transcription factor TCP11
TrEMBL	A0A022R1J8	1e-160	A0A022R1J8_ERYGU; Uncharacterized protein
STRING	Migut.J00521.1.p	1e-164	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA248	24	201

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37000.1	5e-36	TCP family protein

Link Out ? help Back to Top
Phytozome	Migut.J00521.1.p