PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.J00634.1.p

Common Name

MIMGU_mgv1a017807mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

LBD

Protein Properties

Length: 156aa MW: 18197.3 Da PI: 10.4009

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.J00634.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	81.1	1.7e-25	11	100	1	90
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 aCaaCk++r+k ++C+la+yfpae++++++nv +lFG++n lk+lk ++e+er +a++s+++e ++r++ Pv+ ++v +kl+ +++++ Migut.J00634.1.p 11 ACAACKHQRKKYDQNCTLAKYFPAEKSNDYENVYHLFGMQNTLKILKLVDEDERGTAIESIIMEVRMRLEYPVHDHFSVARKLSLEIRCM 100 7*********************************************************************************99998765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50891	16.917	10	110	IPR004883	Lateral organ boundaries, LOB
Pfam	PF03195	5.2E-24	11	100	IPR004883	Lateral organ boundaries, LOB

Sequence ? help Back to Top
Protein Sequence Length: 156 aa Download sequence Send to blast
MANAGPSVYK ACAACKHQRK KYDQNCTLAK YFPAEKSNDY ENVYHLFGMQ NTLKILKLVD 60 EDERGTAIES IIMEVRMRLE YPVHDHFSVA RKLSLEIRCM ATFRWRESLV SRLKRRRKSM 120 KLSARKFPYV KERIIGPARR PVEGSLINRE CVLQK*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.J00634.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012846458.1	1e-56	PREDICTED: LOB domain-containing protein 7-like
TrEMBL	A0A022R9Y4	1e-107	A0A022R9Y4_ERYGU; Uncharacterized protein
STRING	Migut.J00634.1.p	1e-113	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2866	17	52

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72980.1	3e-19	LOB domain-containing protein 7

Link Out ? help Back to Top
Phytozome	Migut.J00634.1.p