PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J00792.1.p
Common NameMIMGU_mgv1a022464mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 234aa    MW: 26603.2 Da    PI: 5.529
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J00792.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.81.9e-1358101755
                       HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         Er+RR+++N+++  Lr+++P+      +K++Ka+i + A+eYIk Lq
  Migut.J00792.1.p  58 VSERNRRKKLNQRLYALRSVVPNI-----TKMDKASIIKDAIEYIKTLQ 101
                       57*********************7.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.05E-1349105No hitNo description
PROSITE profilePS5088816.35551100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.79E-1953118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-1955115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-1557106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.5E-1158101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MEMLENIGDE YKNYWETNMF LQSEELDAYS HSYIEEAISG GYYDSSSPDG TTQSKNIVSE  60
RNRRKKLNQR LYALRSVVPN ITKMDKASII KDAIEYIKTL QEQEKRMQAE ISELESGRPS  120
NTFINYDKHD EAEATALICS KAKRTRRLRV SSMGEKTIVV SITCSKRRDT MVKLCEVFES  180
MNLKIITANI TAFSGRLLKT VFLEADEEEK EVLRSKIEAA IAALNNPDSP MSI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5gnj_A1e-1356101954Transcription factor MYC2
5gnj_B1e-1356101954Transcription factor MYC2
5gnj_E1e-1356101954Transcription factor MYC2
5gnj_F1e-1356101954Transcription factor MYC2
5gnj_G1e-1356101954Transcription factor MYC2
5gnj_I1e-1356101954Transcription factor MYC2
5gnj_M1e-1356101954Transcription factor MYC2
5gnj_N1e-1356101954Transcription factor MYC2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J00792.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012828748.11e-167PREDICTED: transcription factor bHLH35
SwissprotQ2HIV92e-84BH035_ARATH; Transcription factor bHLH35
TrEMBLA0A022PVD91e-171A0A022PVD9_ERYGU; Uncharacterized protein
STRINGMigut.J00792.1.p1e-171(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29232451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.11e-78bHLH family protein