PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J00979.1.p
Common NameMIMGU_mgv1a024778mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family Trihelix
Protein Properties Length: 524aa    MW: 58893.2 Da    PI: 6.678
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J00979.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix94.88.2e-3094179187
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                       rW++qe+l+L+e+r++++ +++++++k+plW+evs+ m +e+g++rs k+C+ek+enl k+ykk+keg+ +r  ++ +++++f+qlea
  Migut.J00979.1.p  94 RWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEVSRIMcEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 179
                       8***********************************998*******************************98..55667*******85 PP
2trihelix44.15.4e-14361447282
          trihelix   2 WtkqevlaLiearremeerlrr..g...klkkplWeevskkmrergferspkqCkekwenlnkrykkikeg.ekkrtsessstcpyf 82 
                       W++ e   L+e+rr+me ++++  g   + +  lW+e++ km+  g+ rsp +Ck+kw+++      ++   +kkr+++s+s+  y+
  Migut.J00979.1.p 361 WPEGEMGRLVEIRRSMEVKFEQirGarlSEEVVLWDEIATKMACLGYDRSPMMCKDKWDSVVANSNDCAIKcNKKRKENSKSSGTYY 447
                       *********************6332333699*****************************998888887541444445555555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007170.05791154IPR001005SANT/Myb domain
PROSITE profilePS500906.9893152IPR017877Myb-like domain
CDDcd122032.17E-2094159No hitNo description
PfamPF138375.8E-2094180No hitNo description
SMARTSM007173.6357424IPR001005SANT/Myb domain
CDDcd122034.28E-15361424No hitNo description
PROSITE profilePS500906.609361422IPR017877Myb-like domain
PfamPF138371.3E-9361435No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0010200Biological Processresponse to chitin
GO:0046621Biological Processnegative regulation of organ growth
GO:0048442Biological Processsepal development
GO:0048498Biological Processestablishment of petal orientation
GO:0090428Biological Processperianth development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0042803Molecular Functionprotein homodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 524 aa     Download sequence    Send to blast
MEDQYGMDDL RQFISSRPLF PPIAQPPPDL LSSHRGLSSG ANPYDMLMFR SDSISTTSAT  60
TAAAGSSSAA GGCFSTGFES GLNNNGGGDG GAGRWPRQET LTLLEIRSRL DPKFKEANQK  120
GPLWDEVSRI MCEEHGYQRS GKKCREKFEN LYKYYKKTKE GKAGRQDGKH YRFFRQLEAL  180
YGSNNTVLSD HPPHHLTTTT LPYSFPTTTT TQLEPPLFQY PNNNNKQSDT SLSLSNYSDA  240
ETSSSSGDGK TGGGDGGGGN NWKLKIRDFI DVQMKKLMDK QEAWMEKMMR AIEHKERERI  300
SREEEWRKMD AERIDRERKF WAGERAWIEA RDAALMEALS KLTGRASPEE RIINNNDGEI  360
WPEGEMGRLV EIRRSMEVKF EQIRGARLSE EVVLWDEIAT KMACLGYDRS PMMCKDKWDS  420
VVANSNDCAI KCNKKRKENS KSSGTYYNTN ESVSNRGGGG GVYGDDSCEQ GNVDHTIRLY  480
DHGNSSPNNN NHNINGNNNN NNNGLNDSCF RYFLGDAYGR IMD*
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that prevents growth. Regulates perianth architecture in flower, mostly in the second whorl, probably by suppressing growth between initiating sepals, ensuring that they remain separate, and by modulating organ shapes. Required for the establishment of auxin flux. {ECO:0000269|PubMed:10572040, ECO:0000269|PubMed:15269176, ECO:0000269|PubMed:18080804}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J00979.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Expression within the newly arising sepals is repressed via the PINOID auxin-response pathway. {ECO:0000269|PubMed:15269176}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012840091.10.0PREDICTED: trihelix transcription factor PTL-like
SwissprotQ9LZS01e-116PTL_ARATH; Trihelix transcription factor PTL
TrEMBLA0A022R6390.0A0A022R639_ERYGU; Uncharacterized protein
STRINGMigut.J00979.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30632451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03680.11e-101Trihelix family protein
Publications ? help Back to Top
  1. Quon T,Lampugnani ER,Smyth DR
    PETAL LOSS and ROXY1 Interact to Limit Growth Within and between Sepals But to Promote Petal Initiation in Arabidopsis thaliana.
    Front Plant Sci, 2017. 8: p. 152
    [PMID:28228771]