PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.J00991.1.p

Common Name

MIMGU_mgv1a025709mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

NAC

Protein Properties

Length: 202aa MW: 23364.2 Da PI: 7.6589

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.J00991.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	126.5	2.2e-39	6	131	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 ppG+rF Ptdeel+++yL k+++++l + +vi+ v+ ++ P L + ++kewyfF++r +kya+g+r+nr++ +g+Wka+ dk+++ Migut.J00991.1.p 6 PPGYRFMPTDEELISDYLLTKIDNRPLAA-DVIQVVNFSDHGPDYLSrEYPPVGDKEWYFFTPRIRKYAKGSRPNRTAGNGFWKASCADKDIK 97 9***********************999.99**********844555699********************************** PP NAM 94 skkgelvglkktLvfykg.rapkgektdWvmheyr 127 +++ +g k tLvf++g ++++g ktdW+mhey+ Migut.J00991.1.p 98 F-NNKIIGHKMTLVFHEGiSSKDGIKTDWIMHEYT 131 9.999********989999*********8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	9.29E-47	3	158	IPR003441	NAC domain
PROSITE profile	PS51005	46.135	5	159	IPR003441	NAC domain
Pfam	PF02365	1.5E-23	6	131	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence Send to blast
MESKYPPGYR FMPTDEELIS DYLLTKIDNR PLAADVIQVV NFSDHGPDYL SREYPPVGDK 60 EWYFFTPRIR KYAKGSRPNR TAGNGFWKAS CADKDIKFNN KIIGHKMTLV FHEGISSKDG 120 IKTDWIMHEY TAIHPSRNKR DADDNMKLDD WVICRIHKNV SKSSSANKRR ANLLENQQQQ 180 EQVAVGENRQ EEEEQVAVRE N*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3swm_A	1e-43	6	168	21	174	NAC domain-containing protein 19
3swm_B	1e-43	6	168	21	174	NAC domain-containing protein 19
3swm_C	1e-43	6	168	21	174	NAC domain-containing protein 19
3swm_D	1e-43	6	168	21	174	NAC domain-containing protein 19
3swp_A	1e-43	6	168	21	174	NAC domain-containing protein 19
3swp_B	1e-43	6	168	21	174	NAC domain-containing protein 19
3swp_C	1e-43	6	168	21	174	NAC domain-containing protein 19
3swp_D	1e-43	6	168	21	174	NAC domain-containing protein 19
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.J00991.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012840103.1	1e-151	PREDICTED: NAC transcription factor 29-like
TrEMBL	A0A022R551	1e-147	A0A022R551_ERYGU; Uncharacterized protein (Fragment)
TrEMBL	A0A022R631	1e-147	A0A022R631_ERYGU; Uncharacterized protein (Fragment)
STRING	Migut.J00991.1.p	1e-151	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA14648	2	10

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15500.1	1e-43	NAC domain containing protein 3

Link Out ? help Back to Top
Phytozome	Migut.J00991.1.p