PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J01031.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family G2-like
Protein Properties Length: 415aa    MW: 46210.4 Da    PI: 7.2162
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J01031.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like106.11.9e-3354108155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       kprl+Wtp+LH+rF+eav+qLGG++kAtPk++l+lm+++gLtl+h+kSHLQkYRl
  Migut.J01031.1.p  54 KPRLKWTPDLHQRFIEAVNQLGGADKATPKSVLKLMGIQGLTLYHLKSHLQKYRL 108
                       79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.41151111IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.2E-3152109IPR009057Homeodomain-like
SuperFamilySSF466891.22E-1653109IPR009057Homeodomain-like
TIGRFAMsTIGR015575.3E-2454109IPR006447Myb domain, plants
PfamPF002492.6E-1056107IPR001005SANT/Myb domain
PfamPF143793.4E-25154201IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    Send to blast
MYHHHHHHHH HQGKNIQAST RMSIPSERHL FLQGPTSSNN NGDQSGLVLS TDAKPRLKWT  60
PDLHQRFIEA VNQLGGADKA TPKSVLKLMG IQGLTLYHLK SHLQKYRLSK SLNGQANTVS  120
NKSATVDRVP GEPNGVHITN QNTAPPLTTT NKNMHIGEAL QMQIEVQRRL HEQLEVQRHL  180
QLRIEAQGKY LQSVLEKAQE TLGGQNMGTV GLEAAKVQLS DLVSKVSTQC FSSAFSDMKE  240
LSDLCMSQQK QANKPTDCSI DSCLTSSFEG SIRDQEVVLY NNLMGLNDKH ALGFRTNTEE  300
RDRKDDGARW REETKESGDD VDRGFINSGN NLSMSIGIEG GDQWNDSGKY YGTEDMFNKG  360
DDGSDGKLLM KTERSEKTKM PLFSTRLDLN TGSENNAASS YKHHQLDLNG FSWS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-2153110158Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-2153110158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A1e-2154110157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-2154110157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-2154110157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-2154110157Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-2153110158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-2153110158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-2153110158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-2153110158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-2153110158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-2153110158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that may activate the transcription of specific genes involved in nitrogen uptake or assimilation (PubMed:15592750). Acts redundantly with MYR1 as a repressor of flowering and organ elongation under decreased light intensity (PubMed:21255164). Represses gibberellic acid (GA)-dependent responses and affects levels of bioactive GA (PubMed:21255164). {ECO:0000269|PubMed:21255164, ECO:0000305|PubMed:15592750}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00331DAPTransfer from AT3G04030Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J01031.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by nitrogen deficiency. {ECO:0000269|PubMed:15592750}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012839685.10.0PREDICTED: uncharacterized protein LOC105960061
SwissprotQ9SQQ91e-119PHL9_ARATH; Myb-related protein 2
TrEMBLA0A022R5J80.0A0A022R5J8_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29462451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04030.31e-120G2-like family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Nakano Y,Naito Y,Nakano T,Ohtsuki N,Suzuki K
    NSR1/MYR2 is a negative regulator of ASN1 expression and its possible involvement in regulation of nitrogen reutilization in Arabidopsis.
    Plant Sci., 2017. 263: p. 219-225
    [PMID:28818378]