PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J01270.1.p
Common NameMIMGU_mgv1a004814mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family TALE
Protein Properties Length: 372aa    MW: 42122.8 Da    PI: 6.0986
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J01270.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox23.69e-083183512154
                       HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
          Homeobox  21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                       k +yp++e++++L +++gL  +q+ +WF N+R +
  Migut.J01270.1.p 318 KWPYPTEEDKARLVQETGLHLKQINNWFINQRKR 351
                       469*****************************87 PP
2ELK28.24.2e-10272293122
               ELK   1 ELKhqLlrKYsgyLgsLkqEFs 22 
                       ELKh L+++Y+++++++++E++
  Migut.J01270.1.p 272 ELKHDLKQGYKEKIVDIREEIL 293
                       9*******************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM012551.4E-16101145IPR005540KNOX1
PfamPF037902.3E-14103144IPR005540KNOX1
SMARTSM012561.1E-22157212IPR005541KNOX2
PfamPF037917.4E-17162211IPR005541KNOX2
PROSITE profilePS512139.673272292IPR005539ELK domain
SMARTSM011888.6E-4272293IPR005539ELK domain
PfamPF037891.9E-6272293IPR005539ELK domain
PROSITE profilePS5007111.564292355IPR001356Homeobox domain
SMARTSM003897.0E-11294359IPR001356Homeobox domain
SuperFamilySSF466894.71E-16294358IPR009057Homeodomain-like
CDDcd000862.32E-11295356No hitNo description
Gene3DG3DSA:1.10.10.603.0E-25299357IPR009057Homeodomain-like
PfamPF059201.4E-17312351IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
MAFQDHRLSQ EAPPLHLPRY SDDHHSSSSA ALFRSIIPDE KPTLTTTAWL NSSTLHHQWL  60
PTQSQPCPLT PPENSDHNQD SGGGDYSNNS NENNTADWEK ERCKVDILSH PLYEQLLSAH  120
VTCLRIATPV DQLPGIDGQL SQSHQLVAKY SLLGHGHGQL PLDDKDLDNF MTHYVLLLSS  180
FKEQLQQHVR VHAMEAVMAC WELEQSFQTL TGVAPSEGTG ATMSDDDEDM NADSDTQINL  240
FDESFDGSDN MGFGPLVPTE TERSLIERVK HELKHDLKQG YKEKIVDIRE EILRKRRAGK  300
LPGDTTSVLK AWWQSHSKWP YPTEEDKARL VQETGLHLKQ INNWFINQRK RNWNTNSSTS  360
SSQKSKRKSI K*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J01270.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012851875.10.0PREDICTED: homeobox protein knotted-1-like LET12 isoform X2
SwissprotP480001e-151KNAT3_ARATH; Homeobox protein knotted-1-like 3
TrEMBLA0A022QCD30.0A0A022QCD3_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14322472
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11060.11e-137KNOTTED1-like homeobox gene 4
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]