PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J01282.1.p
Common NameMIMGU_mgv1a021254mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ZF-HD
Protein Properties Length: 110aa    MW: 12401 Da    PI: 5.4986
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J01282.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer53.27.1e-17450557
       ZF-HD_dimer  5 rYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
                      +Y eC k hA +lGg+ +DGC+Ef+ s +   + + l C  CgCHRnFH + +
  Migut.J01282.1.p  4 KYLECHKSHA-NLGGK-IDGCQEFIWS-D---QNSMLDCDICGCHRNFHWKVE 50
                      79*******7.79997.8********9.3...3579*************9875 PP
2ZF-HD_dimer28.24.6e-0958106358
       ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                       +v+Y +C      +   ++vDGC++f+++ g+      l C AC C  +FH +e  
  Migut.J01282.1.p  58 EVVYTKCNNTRDFEFQ-TTVDGCQDFLSN-GR-----DLGCNACSCNMSFHQKEII 106
                       5677777766666664.579*******98.55.....59**************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047701.9E-13449IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257749.0E-7448IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152316.207549IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047703.0E-759105IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    Send to blast
MGDKYLECHK SHANLGGKID GCQEFIWSDQ NSMLDCDICG CHRNFHWKVE APVVLVTEVV  60
YTKCNNTRDF EFQTTVDGCQ DFLSNGRDLG CNACSCNMSF HQKEIIVKQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J01282.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012851804.13e-27PREDICTED: zinc-finger homeodomain protein 4-like
TrEMBLA0A022Q9C11e-76A0A022Q9C1_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.J01282.1.p9e-77(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1983423
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18835.12e-12mini zinc finger