PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J01283.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ZF-HD
Protein Properties Length: 114aa    MW: 13061.6 Da    PI: 6.2223
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J01283.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer48.42.2e-15450558
       ZF-HD_dimer  5 rYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                      +Y eC k h  +l g   DGC Efmp+     + + l Ca CgCHR +HR+  e
  Migut.J01283.1.p  4 KYGECNKSHE-EL-GRGKDGCLEFMPN-----SYSPLDCAVCGCHRTYHRKVIE 50
                      7******995.44.6789********8.....6789***************875 PP
2ZF-HD_dimer50.45e-1654107359
       ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                       +v+Y  C++ h  +    + DGC+Ef p++++  +aaal+CaACgCH+ FHR ev++
  Migut.J01283.1.p  54 EVVYTYCKRFHYFT-KEDSWDGCQEFFPKNND--EAAALECAACGCHKAFHRDEVSK 107
                       78999999999765.5789*********9555..59****************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047701.4E-11449IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257743.0E-7456IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152315.768548IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047702.4E-1355105IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152313.97557104IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    Send to blast
MEDKYGECNK SHEELGRGKD GCLEFMPNSY SPLDCAVCGC HRTYHRKVIE LRTEVVYTYC  60
KRFHYFTKED SWDGCQEFFP KNNDEAAALE CAACGCHKAF HRDEVSKRVD STS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J01283.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G9FY484e-30A0A2G9FY48_9LAMI; Uncharacterized protein
TrEMBLA0A2G9FYB13e-30A0A2G9FYB1_9LAMI; Uncharacterized protein
STRINGMigut.J01283.1.p5e-80(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28917.12e-11mini zinc finger 2