PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J01289.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ZF-HD
Protein Properties Length: 101aa    MW: 11489.1 Da    PI: 7.3594
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J01289.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer45.32e-14348456
       ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRre 56
                       +YkeC+k    +l g+a DGC+Efm+s      +  lkC  C CHRnFHR+ 
  Migut.J01289.1.p  3 EKYKECRKYL-PQLEGKA-DGCQEFMES-----ITLPLKCDICSCHRNFHRKC 48
                      58****9976.5666765.********9.....4579**************96 PP
2ZF-HD_dimer49.68.9e-1660942259
       ZF-HD_dimer 22 vDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
                      vDGC+Ef ps    g+ ++l+C ACgCH+ FHR e++ 
  Migut.J01289.1.p 60 VDGCREFFPS---GGNLESLTCEACGCHKGFHRNEKTV 94
                      8********9...788*****************99875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD1257745.0E-5447IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047703.1E-10447IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152311.708548IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152313.2194591IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257747.0E-75899IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047706.4E-135992IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    Send to blast
MGEKYKECRK YLPQLEGKAD GCQEFMESIT LPLKCDICSC HRNFHRKCHR IVDFNNPNFV  60
DGCREFFPSG GNLESLTCEA CGCHKGFHRN EKTVEVTSTH *
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J01289.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012851804.12e-16PREDICTED: zinc-finger homeodomain protein 4-like
TrEMBLA0A022QBF58e-32A0A022QBF5_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.J01289.1.p5e-69(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18835.11e-11mini zinc finger