PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J01291.1.p
Common NameMIMGU_mgv1a026693mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ZF-HD
Protein Properties Length: 124aa    MW: 13544.5 Da    PI: 7.6622
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J01291.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer408.8e-13551558
       ZF-HD_dimer  5 rYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                       Y eC+k h  + G   +DGC+Ef        + +  +C  CgCHRn+HR+ v 
  Migut.J01291.1.p  5 LYAECQKSHPHNGG--KTDGCQEFSGG-----SLSLPECIVCGCHRNYHRKLVY 51
                      7********97744..48******875.....677889************9765 PP
2ZF-HD_dimer46.11.2e-145098559
       ZF-HD_dimer  5 rYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
                      +Y +C k    ++  ++vDGC+ f+p+     +a  l CaACgCHRnFHR ev++
  Migut.J01291.1.p 50 VYTKCNKVRDFKIP-NSVDGCQLFIPD-----SAPWLICAACGCHRNFHRIEVTK 98
                      78889888888885.689********9.....5789**************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047702.0E-9548IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257741.0E-6653IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152314.854649IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047702.2E-125095IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152312.9385195IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257749.0E-564106IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    Send to blast
MGDQLYAECQ KSHPHNGGKT DGCQEFSGGS LSLPECIVCG CHRNYHRKLV YTKCNKVRDF  60
KIPNSVDGCQ LFIPDSAPWL ICAACGCHRN FHRIEVTKEE VVSTAFGTAA AAVPFELKKE  120
PLS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J01291.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012851804.15e-25PREDICTED: zinc-finger homeodomain protein 4-like
TrEMBLA0A022QCF11e-87A0A022QCF1_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.J01291.1.p2e-88(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74660.11e-10mini zinc finger 1