PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.J01298.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

ZF-HD

Protein Properties

Length: 118aa MW: 13429.3 Da PI: 8.2653

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.J01298.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	22.6	2.5e-07	2	46	3	57
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 +v+Y eC k h g +D C+E+ ++ C CgCH FHR+ + Migut.J01298.1.p 2 GVKYAECNKLHE--HMGWKTDRCQEYEGY--------SFYCQICGCHQKFHRKVE 46 689***9995..446789**886........9*************86 PP
2	ZF-HD_dimer	54.6	2.6e-17	58	114	2	59
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 +kv+Y +C k h + + +vDGC+Ef+p+ +e ++ +al+C CgCH+ FHR ev++ Migut.J01298.1.p 58 TKVVYTNCNKIHDFRFQT-TVDGCQEFTPNGKEGSSDNALTCGVCGCHKVFHRNEVTK 114 6899********9965.79****95555999**************99865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04770	5.8E-4	3	46	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDom	PD125774	1.0E-6	58	116	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Pfam	PF04770	5.5E-15	60	112	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profile	PS51523	15.539	62	111	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain

Sequence ? help Back to Top
Protein Sequence Length: 118 aa Download sequence Send to blast
MGVKYAECNK LHEHMGWKTD RCQEYEGYSF YCQICGCHQK FHRKVEAVSP KPVVNYKTKV 60 VYTNCNKIHD FRFQTTVDGC QEFTPNGKEG SSDNALTCGV CGCHKVFHRN EVTKVVP*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.J01298.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012851804.1	2e-83	PREDICTED: zinc-finger homeodomain protein 4-like
TrEMBL	A0A022QFJ6	2e-40	A0A022QFJ6_ERYGU; Uncharacterized protein (Fragment)
STRING	Migut.J01298.1.p	6e-83	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA19834	2	3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G74660.1	1e-10	mini zinc finger 1

Link Out ? help Back to Top
Phytozome	Migut.J01298.1.p