PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J01315.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ARR-B
Protein Properties Length: 534aa    MW: 59013.8 Da    PI: 7.1629
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J01315.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like91.28.7e-29193246155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       kpr++W+ eLH++Fv av+qL G+ekA+Pk+il+lm+v+gLt+e+v+SHLQkYRl
  Migut.J01315.1.p 193 KPRVVWSIELHRKFVGAVNQL-GIEKAVPKRILDLMNVEGLTRENVASHLQKYRL 246
                       79*******************.********************************8 PP
2Response_reg81.62.5e-27221301109
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       vl vdD+p+ ++ll ++l+k +y +v+++++++ al++l+e++  +D+++ D+ mp+mdG++ll+     e++lp+i+++a+g+++++ + + 
  Migut.J01315.1.p  22 VLAVDDDPICLKLLDTLLRKCQY-HVTTTSQARMALKMLRENRdrFDVVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGDPKLVMKGIT 112
                       799********************.***************999889*******************87754.558******************** PP

                       TTESEEEESS--HHHHHH CS
      Response_reg  92 aGakdflsKpfdpeelvk 109
                        Ga d+l Kp+ +eel +
  Migut.J01315.1.p 113 HGACDYLLKPVRIEELKN 130
                       ***************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23008.5E-4419157No hitNo description
SuperFamilySSF521722.7E-3619150IPR011006CheY-like superfamily
SMARTSM004482.9E-3120132IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011043.93221136IPR001789Signal transduction response regulator, receiver domain
PfamPF000721.4E-2422130IPR001789Signal transduction response regulator, receiver domain
CDDcd001568.06E-2923136No hitNo description
PROSITE profilePS5129410.214190249IPR017930Myb domain
Gene3DG3DSA:1.10.10.609.9E-30190251IPR009057Homeodomain-like
SuperFamilySSF466895.73E-19191250IPR009057Homeodomain-like
TIGRFAMsTIGR015571.9E-24193246IPR006447Myb domain, plants
PfamPF002492.0E-5195245IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0009414Biological Processresponse to water deprivation
GO:0010082Biological Processregulation of root meristem growth
GO:0010380Biological Processregulation of chlorophyll biosynthetic process
GO:0031537Biological Processregulation of anthocyanin metabolic process
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048367Biological Processshoot system development
GO:0080022Biological Processprimary root development
GO:0080036Biological Processregulation of cytokinin-activated signaling pathway
GO:0080113Biological Processregulation of seed growth
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 534 aa     Download sequence    Send to blast
MTVEKTRGGD ENCDNFPVGL RVLAVDDDPI CLKLLDTLLR KCQYHVTTTS QARMALKMLR  60
ENRDRFDVVI SDVHMPDMDG FKLLELVGLE MDLPVIMLSA NGDPKLVMKG ITHGACDYLL  120
KPVRIEELKN IWQHVLRRKK FEPKNQNNKS SDQNANADQN GDQNGKFSRK RKEDEDVSED  180
NGNESDDPSS QKKPRVVWSI ELHRKFVGAV NQLGIEKAVP KRILDLMNVE GLTRENVASH  240
LQKYRLYLRR ISSVANQQAN MASALGIKDS PFMRMGPFED YRTLSAQGRL TPNAPLSHYT  300
TNGTMLGRLN TPANNINLHN LITPSTLIQP NHAQISKISP STQNPSLFQG IPSPLELDQL  360
QQNLVSFNGV GGFGNIPSYN SESFDACVNN NNGSAMQQNL LLSTEPTFHN SSRHNGFSGG  420
AYLQNNPCDI ISPTTMAALP MEDCREMQNY GHGSKSTFGM PNGLINPSNG AVLSPLRQDL  480
DQGGGVFNEK MQMFVNGRLA TESRGMGGND GFALLEQPKM HGGFFLGPGG WMI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A3e-25189252164ARR10-B
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J01315.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012851842.10.0PREDICTED: two-component response regulator ARR12-like
SwissprotB8B3I41e-134ORR22_ORYSI; Two-component response regulator ORR22
TrEMBLA0A2G9GDC80.0A0A2G9GDC8_9LAMI; Two-component response regulator
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22582458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-121response regulator 12