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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | Migut.J01345.1.p | ||||||||
| Common Name | LOC105960226, MIMGU_mgv1a021004mg | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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| Family | SAP | ||||||||
| Protein Properties | Length: 457aa MW: 50563.2 Da PI: 8.1135 | ||||||||
| Description | SAP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | SAP | 721.4 | 8.7e-220 | 1 | 455 | 1 | 455 |
SAP 1 mssssssssseseegseggeggdassgesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsrsdllw 93
ms++sss++ e+ eg g+ s +++++++ +++++++vwpePf+ea+a++vaida+ +lGrlaaa+al+++f+vcstwra+srs+llw
Migut.J01345.1.p 1 MSTPSSSEEVERVEGG-----GG--SSSRGRRMRLSSINSYGVWPEPFVEAFAYKVAIDAALNLGRLAAAQALFHIFRVCSTWRAISRSELLW 86
9999999999888772.....33..3468899************************************************************* PP
SAP 94 qrltrriWrrt.kllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdletrlhvst 185
q+lt+riW+++ llr+tWreeyiyrhrta+nfr+rry+++tlq++ + d dn++ ++sCr+lalsd++laaGf+dGavrlf+l +++h+st
Migut.J01345.1.p 87 QNLTQRIWNINhLLLRHTWREEYIYRHRTAANFRRRRYAHTTLQYYIPPDDYDNNIGQHSCRRLALSDHHLAAGFSDGAVRLFHLPSSRHLST 179
**********94468****************************************************************************** PP
SAP 186 flpqhrdrlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaetee 278
f+pqhrdr+Grfsr+vsGi++sd++lvfatldGdih +vi+g g+++ rra++GdvvndGalvdf+G++rWwvGlyaGvpGrafhiW++et e
Migut.J01345.1.p 180 FYPQHRDRIGRFSRSVSGIILSDISLVFATLDGDIHATVIHGGGTGPLRRAHMGDVVNDGALVDFTGNSRWWVGLYAGVPGRAFHIWNNETGE 272
********************************************************************************************* PP
SAP 279 lvfvGGsltdPeavmGWhmltelt.elvGrvrvter.etavaCtslrlvvfdlrnq.gvvlreeeer....rGlivssldasneayvvvdsrG 364
lvf+GG+ltdP+a+mGWh+lte+t +++Grvr+t++ ++++aCtslr++vfdl+nq g+vl+e +++ rG+ivss+d+++++++++dsrG
Migut.J01345.1.p 273 LVFIGGTLTDPQALMGWHSLTEITdDVIGRVRITNHgNAVIACTSLRVIVFDLQNQvGLVLGELQQQlvrsRGIIVSSFDSNADSALIADSRG 365
************************7799********9999****************99*****999888899********************* PP
SAP 365 vatvrrvenleevcrfrvrgaqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervg.evnalvaddrhvavsssdgtihlldfgaq 455
+at+rrv +l+e+crf+vrg + vlgCvnggy++v++ggv+rvWeie+ + y+ys+rer+g ++alv+d+r+va+++s+g++h++dfgaq
Migut.J01345.1.p 366 AATLRRVVDLTEICRFTVRGG-GLVLGCVNGGYGVVFGGGVIRVWEIESGG-YMYSFRERIGeFCDALVVDERYVAACASSGVVHVWDFGAQ 455
*******************75.89************************966.**********889*************************97 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Gene3D | G3DSA:1.20.1280.50 | 3.7E-7 | 63 | 131 | No hit | No description |
| SuperFamily | SSF81383 | 2.29E-7 | 64 | 115 | IPR001810 | F-box domain |
| SuperFamily | SSF50978 | 2.26E-10 | 144 | 214 | IPR017986 | WD40-repeat-containing domain |
| Gene3D | G3DSA:2.130.10.10 | 2.3E-9 | 144 | 213 | IPR015943 | WD40/YVTN repeat-like-containing domain |
| SuperFamily | SSF50978 | 2.26E-10 | 264 | 452 | IPR017986 | WD40-repeat-containing domain |
| Gene3D | G3DSA:2.130.10.10 | 2.3E-9 | 404 | 452 | IPR015943 | WD40/YVTN repeat-like-containing domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0005515 | Molecular Function | protein binding | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 457 aa Download sequence Send to blast |
MSTPSSSEEV ERVEGGGGSS SRGRRMRLSS INSYGVWPEP FVEAFAYKVA IDAALNLGRL 60 AAAQALFHIF RVCSTWRAIS RSELLWQNLT QRIWNINHLL LRHTWREEYI YRHRTAANFR 120 RRRYAHTTLQ YYIPPDDYDN NIGQHSCRRL ALSDHHLAAG FSDGAVRLFH LPSSRHLSTF 180 YPQHRDRIGR FSRSVSGIIL SDISLVFATL DGDIHATVIH GGGTGPLRRA HMGDVVNDGA 240 LVDFTGNSRW WVGLYAGVPG RAFHIWNNET GELVFIGGTL TDPQALMGWH SLTEITDDVI 300 GRVRITNHGN AVIACTSLRV IVFDLQNQVG LVLGELQQQL VRSRGIIVSS FDSNADSALI 360 ADSRGAATLR RVVDLTEICR FTVRGGGLVL GCVNGGYGVV FGGGVIRVWE IESGGYMYSF 420 RERIGEFCDA LVVDERYVAA CASSGVVHVW DFGAQI* |
| Functional Description ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Description | |||||
| UniProt | Transcriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule. | |||||
| Cis-element ? help Back to Top | |
|---|---|
| Source | Link |
| PlantRegMap | Migut.J01345.1.p |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_012839852.1 | 0.0 | PREDICTED: transcriptional regulator STERILE APETALA-like | ||||
| Swissprot | Q9FKH1 | 1e-144 | SAP_ARATH; Transcriptional regulator STERILE APETALA | ||||
| TrEMBL | A0A022R3V1 | 0.0 | A0A022R3V1_ERYGU; Uncharacterized protein | ||||
| STRING | Migut.J01345.1.p | 0.0 | (Erythranthe guttata) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Asterids | OGEA4099 | 23 | 45 |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT5G35770.1 | 1e-116 | SAP family protein | ||||
| Link Out ? help Back to Top | |
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| Phytozome | Migut.J01345.1.p |
| Entrez Gene | 105960226 |
| Publications ? help Back to Top | |||
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