PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J01356.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 588aa    MW: 66734.4 Da    PI: 8.6867
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J01356.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM143.41.3e-441372632128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       ppG+rF P+d el+v+yL k+++++ +++   i++v++y+++P++L     k +e+ewy+F++rd+ky++g+r++r++ +gyWkatg+dk+++
  Migut.J01356.1.p 137 PPGYRFAPKDTELIVDYLLKRIRDEYIPV-PEISNVNLYQANPQTLGaIYPKLGENEWYYFTPRDRKYKNGSRPSRSAGTGYWKATGSDKSIC 228
                       9****************************.56**************7345566999************************************* PP

               NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       s++ge vg kk+Lvfy+g+ p g+kt+W+mheyr 
  Migut.J01356.1.p 229 SSNGEIVGYKKSLVFYEGKPPAGTKTNWIMHEYRS 263
                       *********************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.45E-51134291IPR003441NAC domain
PROSITE profilePS5100551.321136291IPR003441NAC domain
PfamPF023651.2E-22137262IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 588 aa     Download sequence    Send to blast
MGRFLGSGPP DLIANRLSNR TEGSSAANKR NNKRCEDVIL SSTSITSHIP TTTCCHKLQK  60
EKKIPKTKKL RFRADVKALP QLQTTIISSY IPRRIISVQN IPAAELSPAE TNSSQVVIPM  120
RPHYIPGHGN YATKPYPPGY RFAPKDTELI VDYLLKRIRD EYIPVPEISN VNLYQANPQT  180
LGAIYPKLGE NEWYYFTPRD RKYKNGSRPS RSAGTGYWKA TGSDKSICSS NGEIVGYKKS  240
LVFYEGKPPA GTKTNWIMHE YRSNEPSRAR PSTDKLDMRL DDFVLCRVYE KTGEPADNPV  300
KEKSNARRAN KKAVVKEVVV EEANDKKDEQ PQPEEVAASD LRSDNTSHDA AAALNEDHRF  360
DSELYIAKFD VSSEEYQFPE FEQILSEDEL YLDWLQLHNS PDFNSQQVHL DWLQLPNSPD  420
FNSQQVHCND IYDGSRFFSS DGDLSSTFNR SMPNKRNLDS MQNNGISESM QNNWNPGIMQ  480
NNWNPGSMQN NWHPGSMPTC QVFRIRAACQ VFRIRAACQV SCQIFRIRAA CQIFRIRAAC  540
QIHITIQTII GRLMLTIFDN IGGITLACMR RIRGILPLNC QIFTEKT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A6e-5013729118165NO APICAL MERISTEM PROTEIN
1ut4_B6e-5013729118165NO APICAL MERISTEM PROTEIN
1ut7_A6e-5013729118165NO APICAL MERISTEM PROTEIN
1ut7_B6e-5013729118165NO APICAL MERISTEM PROTEIN
3swm_A6e-5013729121168NAC domain-containing protein 19
3swm_B6e-5013729121168NAC domain-containing protein 19
3swm_C6e-5013729121168NAC domain-containing protein 19
3swm_D6e-5013729121168NAC domain-containing protein 19
3swp_A6e-5013729121168NAC domain-containing protein 19
3swp_B6e-5013729121168NAC domain-containing protein 19
3swp_C6e-5013729121168NAC domain-containing protein 19
3swp_D6e-5013729121168NAC domain-containing protein 19
4dul_A6e-5013729118165NAC domain-containing protein 19
4dul_B6e-5013729118165NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J01356.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012839872.10.0PREDICTED: NAC transcription factor 25-like
TrEMBLA0A022R5S00.0A0A022R5S0_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.J01356.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA74624103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.11e-51NAC domain containing protein 47