PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J01640.1.p
Common NameLOC105949306, MIMGU_mgv1a013667mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 214aa    MW: 24374.7 Da    PI: 9.6028
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J01640.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.13.7e-093682354
                      HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                      ++h+e+Er+RR+riN  +++Lr+l   +      K +Ka+ L k+v+ +k+L
  Migut.J01640.1.p 36 ENHKEAERKRRERINGHLHRLRSLRLCN-----SKIDKASLLAKVVQRVKEL 82
                      68**********************8887.....7************999988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.7E-112791IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.8333382IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-103692IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.93E-83685No hitNo description
PfamPF000101.6E-63682IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.6E-63988IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048730.00515125188No hitNo description
Gene3DG3DSA:3.30.70.2602.1E-4125188No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MQPKNSPEYS YLDQLLGGNY GFPARSDNRS ATAASENHKE AERKRRERIN GHLHRLRSLR  60
LCNSKIDKAS LLAKVVQRVK ELKQQTSEIV QHDQTFPSEA DEIEVFKHEE YYSFGGKSSS  120
VVKASLCCDD RADLVPDLIE ILKSLRLSPL RAEMVTLGGR IRNVMILAGD ENRTDESVLL  180
LRDALKTLVV RSNYVSGERS KRRRWFDERM IIG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14146ERKRRE
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J01640.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012828048.11e-156PREDICTED: transcription factor bHLH106
SwissprotQ9LET02e-51BH107_ARATH; Putative transcription factor bHLH107
TrEMBLA0A022PS651e-155A0A022PS65_ERYGU; Uncharacterized protein
STRINGMigut.J01640.1.p1e-156(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA128411718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.19e-54bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]