PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.J01664.1.p

Common Name

LOC105949312, MIMGU_mgv1a012772mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

bHLH

Protein Properties

Length: 241aa MW: 27199.7 Da PI: 9.5761

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.J01664.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	48.5	1.6e-15	69	121	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ +hn+ Er RR++iN+ ++ Lr+llP+ + +s+Kls +++ ++v+YI + q Migut.J01664.1.p 69 KKLNHNASERDRRKKINNLYSSLRSLLPNeD---QSRKLSIPATVSRVVKYIPEIQ 121 6789***********************77...****************8776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	7.2E-17	66	142	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	14.729	68	120	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.05E-12	69	125	No hit	No description
Gene3D	G3DSA:4.10.280.10	1.1E-13	69	139	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.2E-12	69	121	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.3E-10	74	126	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence Send to blast
MMALSHQFCS VGWLLDDPIS HDHHQANMIN YLSADRPQDT SEYSIDLHSP NSSRTNPKIN 60 GGDGNKTVKK LNHNASERDR RKKINNLYSS LRSLLPNEDQ SRKLSIPATV SRVVKYIPEI 120 QKEVERLTHK KEMLTSKITS PSAPSSFGLK KQNNINSSAV TATQIGEREI VFQISKADYQ 180 KRALQISEAV TTFEEQGFLL TNATSFESFD GRIFFNLHIQ AQGSHQVMNA EILKEKLWPF 240 *

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.J01664.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012828055.1	1e-180	PREDICTED: transcription factor ORG2-like
TrEMBL	A0A022PS88	1e-179	A0A022PS88_ERYGU; Uncharacterized protein
STRING	Migut.J01664.1.p	1e-179	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2226	22	56

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56970.1	4e-41	bHLH family protein

Link Out ? help Back to Top
Phytozome	Migut.J01664.1.p
Entrez Gene	105949312