PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J01847.1.p
Common NameLOC105955167, MIMGU_mgv1a024232mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HD-ZIP
Protein Properties Length: 255aa    MW: 28587.8 Da    PI: 8.503
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J01847.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.42.5e-18103157256
                       T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                       rk+ ++tkeq   Le+ F+++++++ +++  LAk+l+L  rqV vWFqNrRa+ k
  Migut.J01847.1.p 103 RKKLRLTKEQSAFLEDSFKEHNTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTK 157
                       78889************************************************98 PP
2HD-ZIP_I/II127.27.2e-41103191190
       HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                       +kk+rl+keq+++LE+sF+e+++L+p++Kv+la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l++en++L+ke +eL+ +
  Migut.J01847.1.p 103 RKKLRLTKEQSAFLEDSFKEHNTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRWCETLTQENKKLHKELSELK-A 191
                       69*************************************************************************************9.4 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.3E-1881156IPR009057Homeodomain-like
SuperFamilySSF466891.75E-1991160IPR009057Homeodomain-like
PROSITE profilePS5007117.24899159IPR001356Homeobox domain
SMARTSM003892.0E-16101163IPR001356Homeobox domain
PfamPF000469.6E-16103157IPR001356Homeobox domain
CDDcd000868.32E-15103160No hitNo description
PROSITE patternPS000270134157IPR017970Homeobox, conserved site
Gene3DG3DSA:1.20.5.1706.3E-4157203No hitNo description
SMARTSM003405.1E-19159202IPR003106Leucine zipper, homeobox-associated
PfamPF021831.1E-10159192IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MEINLKRNEE AILLQGASNN NNNSSSSPNS STVSSFQMNF SVFRPNSAIS RKRGFEKIAE  60
NNNNINSCEL LGEADRIRGS DDDNDNDNDE DEINGNNNNN MSRKKLRLTK EQSAFLEDSF  120
KEHNTLNPKQ KVALAKQLNL RPRQVEVWFQ NRRARTKLKQ TEVDCEYLKR WCETLTQENK  180
KLHKELSELK ALNSHPNSFF MQLPPTTLTM CPSCERVAPT TAAAAQSPVT ATTAAASKHF  240
SLSPSHIAHA QHAS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1101107SRKKLRL
2151159RRARTKLKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J01847.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012834323.10.0PREDICTED: homeobox-leucine zipper protein HAT14
SwissprotP466652e-69HAT14_ARATH; Homeobox-leucine zipper protein HAT14
TrEMBLA0A022RJQ50.0A0A022RJQ5_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29024186
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06710.12e-65homeobox from Arabidopsis thaliana