PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.K00047.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

G2-like

Protein Properties

Length: 306aa MW: 34922.8 Da PI: 5.0149

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.K00047.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	95.3	4.7e-30	143	197	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt++LH+rFve v++LGG+ekAtPk+il+lm +gLt+ +vkSHLQkYR Migut.K00047.1.p 143 KTRIRWTQDLHDRFVESVNRLGGPEKATPKAILKLMCTEGLTILQVKSHLQKYRQ 197 68****************************************************6 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	9.5E-17	141	197	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	3.3E-26	141	197	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.2E-24	143	197	IPR006447	Myb domain, plants
Pfam	PF00249	2.1E-8	147	196	IPR001005	SANT/Myb domain
Pfam	PF14379	1.4E-17	227	274	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence Send to blast
MMKRTHQNYG FSTDYNFTSD FHYNSQLQSS PMGLVNQSSP PAFYATEEVY TGLSRYNNTV 60 CSDVQIPNTN HYIMSDNSLS ESEQLLYLKN KLLGDLDDEN HNLGASQDLY ASHFDNINQL 120 GRQPGCFSAV SSSNNCGSVS SCKTRIRWTQ DLHDRFVESV NRLGGPEKAT PKAILKLMCT 180 EGLTILQVKS HLQKYRQVKF VPESVEGRSE KKNSTNNVAQ IDMETGMQIK EALLLQLDVQ 240 RRLHEQLEIQ KKLQLRIEQE AKRLKVMIDQ QQKTTSDFTH EREEDDEEEE DSEVFVLEGS 300 DEHVI*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	2e-20	143	200	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	2e-20	143	200	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	2e-20	143	200	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	2e-20	143	200	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	2e-20	143	200	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	2e-20	143	200	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	2e-20	143	200	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	2e-20	143	200	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.K00047.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012857186.1	1e-157	PREDICTED: protein PHR1-LIKE 1-like
TrEMBL	A0A022Q0M9	1e-169	A0A022Q0M9_ERYGU; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2491	24	58

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	3e-59	G2-like family protein

Link Out ? help Back to Top
Phytozome	Migut.K00047.1.p