PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K00222.1.p
Common NameLOC105976534, MIMGU_mgv1a011578mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 278aa    MW: 31487.3 Da    PI: 6.5094
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K00222.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.93.6e-161562148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd  lv +++++G+g+W +++   g+ R+ k+c++rw +yl
  Migut.K00222.1.p 15 KGPWTPEEDIVLVSYIQEHGPGNWFAVPTNTGLLRCSKSCRLRWTNYL 62
                      79******************************99************97 PP
2Myb_DNA-binding45.22.1e-1468113148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rg++T+ E+  ++++ +++G++ W++Ia++++  Rt++++k++w+++l
  Migut.K00222.1.p  68 RGNFTPHEEGMIIHLQALFGNK-WAAIASYLP-QRTDNDIKNYWNTHL 113
                       89********************.*********.************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129423.1391066IPR017930Myb domain
SuperFamilySSF466891.24E-2913109IPR009057Homeodomain-like
SMARTSM007172.4E-131464IPR001005SANT/Myb domain
PfamPF002497.0E-151562IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.4E-211669IPR009057Homeodomain-like
CDDcd001671.02E-101762No hitNo description
SMARTSM007172.0E-1367115IPR001005SANT/Myb domain
PROSITE profilePS5129418.63867117IPR017930Myb domain
PfamPF002496.4E-1368113IPR001005SANT/Myb domain
CDDcd001678.05E-1070113No hitNo description
Gene3DG3DSA:1.10.10.603.5E-2570118IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009416Biological Processresponse to light stimulus
GO:0009737Biological Processresponse to abscisic acid
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0010118Biological Processstomatal movement
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MGRPPPSCDK VVIKKGPWTP EEDIVLVSYI QEHGPGNWFA VPTNTGLLRC SKSCRLRWTN  60
YLKPGIKRGN FTPHEEGMII HLQALFGNKW AAIASYLPQR TDNDIKNYWN THLKKKLKKI  120
QAQSPPLTPH VAYDSTKPRN HSDLKITENS SVYASSSQNI SSLLQEWNNT STTCDLDRNI  180
RNIGKIPTEF SDDYSTLLQY YRPQQQQFDC SILSKDRSFI EEKSSCDSSQ KGSDQSSGPI  240
TDQEKIDDNP APLSFLDEWL LDASASQVED MEIPQMF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h8a_C5e-241311725128MYB TRANSFORMING PROTEIN
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in the regulation of gene (e.g. drought-regulated and flavonoid biosynthetic genes) expression and stomatal movements leading to negative regulation of responses to drought and responses to other physiological stimuli (e.g. light). {ECO:0000269|PubMed:22018045}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00132DAPTransfer from AT1G08810Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K00222.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by abscisic acid (ABA) and osmotic stress (salt stress). {ECO:0000269|PubMed:22018045}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012857223.10.0PREDICTED: myb-related protein 306-like
SwissprotB3VTV75e-96MYB60_VITVI; Transcription factor MYB60
TrEMBLA0A022PZG20.0A0A022PZG2_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.13e-88myb domain protein 60
Publications ? help Back to Top
  1. Jaillon O, et al.
    The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla.
    Nature, 2007. 449(7161): p. 463-7
    [PMID:17721507]