PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K00228.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HD-ZIP
Protein Properties Length: 196aa    MW: 23253.4 Da    PI: 7.8528
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K00228.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox573.2e-1881133254
                       T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
          Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                       rk+ ++t++q++ Le+ F++++++++++++ LA+kl++++rqV vWFqNrRa 
  Migut.K00228.1.p  81 RKKMRLTRDQTTLLEDSFRQHSTLTTAQKQALAEKLNVKTRQVEVWFQNRRAW 133
                       78899**********************************************95 PP
2HD-ZIP_I/II102.63.4e-3381172192
       HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                       +kk rl+++q +lLE+sF+++++L++ +K++la++L++++rqv+vWFqnrRA tk+kq+E d+++Lk+++++l+een+rL+ke  eLr+ +k
  Migut.K00228.1.p  81 RKKMRLTRDQTTLLEDSFRQHSTLTTAQKQALAEKLNVKTRQVEVWFQNRRAWTKLKQTEADFQFLKKTWERLMEENCRLKKELIELRSYIK 172
                       69*************************************************************************************98775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.1E-1663134IPR009057Homeodomain-like
SuperFamilySSF466894.6E-1668138IPR009057Homeodomain-like
PROSITE profilePS5007115.90477137IPR001356Homeobox domain
SMARTSM003898.5E-1280141IPR001356Homeobox domain
PfamPF000462.1E-1581134IPR001356Homeobox domain
CDDcd000862.94E-1281132No hitNo description
PROSITE patternPS000270112135IPR017970Homeobox, conserved site
SMARTSM003407.3E-7137181IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
MDEHDDQYCN TTLGLGLNPY EPKREDQKKV KPMLFLDLSI SRHPDDLRII DSSLSLNLFE  60
NYEKESENKE YDSNSYKNCS RKKMRLTRDQ TTLLEDSFRQ HSTLTTAQKQ ALAEKLNVKT  120
RQVEVWFQNR RAWTKLKQTE ADFQFLKKTW ERLMEENCRL KKELIELRSY IKIETPPPPP  180
PPCFFRLPYC EGPEA*
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K00228.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}.
UniProtINDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012857274.11e-143PREDICTED: homeobox-leucine zipper protein HOX19-like
SwissprotA2XE762e-34HOX19_ORYSI; Homeobox-leucine zipper protein HOX19
SwissprotQ8GRL42e-34HOX19_ORYSJ; Homeobox-leucine zipper protein HOX19
TrEMBLA0A022Q2Z66e-71A0A022Q2Z6_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1613945
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22800.12e-32HD-ZIP family protein