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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | Migut.K00325.1.p | ||||||||
| Common Name | LOC105961382, MIMGU_mgv1a025611mg | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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| Family | SAP | ||||||||
| Protein Properties | Length: 461aa MW: 49795.6 Da PI: 5.9318 | ||||||||
| Description | SAP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | SAP | 756.9 | 1.5e-230 | 1 | 460 | 1 | 455 |
SAP 1 mssssssssseseegseggeggdassgesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsrsdllw 93
ms+ssssss+++e+g +gg++g++ ++ ++s+sr r++nevwpePfleala+q+a+das slGrlaaa+al+n+fqv++tw+a+srsdllw
Migut.K00325.1.p 1 MSTSSSSSSEQEEAGPRGGAAGGEF-DQGPSSSRSRIRWSNEVWPEPFLEALAFQLAVDASLSLGRLAAAHALFNIFQVSTTWQAISRSDLLW 92
9**************9999998888.455577788888******************************************************* PP
SAP 94 qrltrriWrrt..kllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdletrlhvs 184
++lt+riW++ +l+r+tWreeyiyrhrta+nfr+rry+y+tl+f p+d++++n++d lsCr+lals +y+aaGf+dGav+lf+l+t +h+s
Migut.K00325.1.p 93 RNLTQRIWNVGgdDLIRATWREEYIYRHRTASNFRSRRYTYTTLHFVPTDNNNNNNNDGLSCRRLALSGRYIAAGFSDGAVHLFRLSTGAHIS 185
*********98879******************************************************************************* PP
SAP 185 tflpqhrdrlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaete 277
tf+pqhrdrlGrfs+avsGiv+sdsrlvfatldGdih+av+ g+gaa+ rra+lGdvvndGalvdfaG ++WwvGl+aGvpG+afhiW+++te
Migut.K00325.1.p 186 TFYPQHRDRLGRFSSAVSGIVLSDSRLVFATLDGDIHTAVVGGDGAAPLRRAHLGDVVNDGALVDFAGGDQWWVGLFAGVPGHAFHIWNGQTE 278
********************************************************************************************* PP
SAP 278 elvfvGGsltdPeavmGWhmlteltelvGrvrvter.etavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrGvatvr 369
elvfvGG+ltdPeavmGWh+ltelt+l+Grvrvt+r +ta+aCtslr v+fdl+nqgvvl+eee+rrG++v+s+da+n ++vv+d rG atvr
Migut.K00325.1.p 279 ELVFVGGTLTDPEAVMGWHLLTELTDLIGRVRVTGRgTTALACTSLRAVAFDLQNQGVVLAEEEFRRGVVVGSFDAANASAVVADVRGGATVR 371
************************************999****************************************************** PP
SAP 370 rvenleevcrfrvrg...aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihlldfgaq 455
rv++l+evcrf+vrg aq++vlgCvngg+++v++gg++rvWeie ++ylys+re++g +nal+ad+r+va++ssdgtihl+dfgaq
Migut.K00325.1.p 372 RVDDLAEVCRFSVRGaagAQGEVLGCVNGGFGVVWGGGIIRVWEIELYGQYLYSFREGIGICNALIADERYVAACSSDGTIHLWDFGAQ 460
**************988899*******************************************************************97 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| SuperFamily | SSF81383 | 7.41E-7 | 70 | 122 | IPR001810 | F-box domain |
| Gene3D | G3DSA:1.20.1280.50 | 1.3E-5 | 71 | 143 | No hit | No description |
| SuperFamily | SSF50978 | 1.1E-13 | 151 | 221 | IPR017986 | WD40-repeat-containing domain |
| Gene3D | G3DSA:2.130.10.10 | 2.6E-11 | 154 | 220 | IPR015943 | WD40/YVTN repeat-like-containing domain |
| SuperFamily | SSF50978 | 1.1E-13 | 327 | 457 | IPR017986 | WD40-repeat-containing domain |
| Gene3D | G3DSA:2.130.10.10 | 2.6E-11 | 409 | 457 | IPR015943 | WD40/YVTN repeat-like-containing domain |
| PROSITE profile | PS50082 | 9.105 | 439 | 460 | IPR001680 | WD40 repeat |
| PROSITE pattern | PS00678 | 0 | 443 | 457 | IPR019775 | WD40 repeat, conserved site |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0009554 | Biological Process | megasporogenesis | ||||
| GO:0009908 | Biological Process | flower development | ||||
| GO:0030163 | Biological Process | protein catabolic process | ||||
| GO:0046622 | Biological Process | positive regulation of organ growth | ||||
| GO:0005634 | Cellular Component | nucleus | ||||
| GO:0005515 | Molecular Function | protein binding | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 461 aa Download sequence Send to blast |
MSTSSSSSSE QEEAGPRGGA AGGEFDQGPS SSRSRIRWSN EVWPEPFLEA LAFQLAVDAS 60 LSLGRLAAAH ALFNIFQVST TWQAISRSDL LWRNLTQRIW NVGGDDLIRA TWREEYIYRH 120 RTASNFRSRR YTYTTLHFVP TDNNNNNNND GLSCRRLALS GRYIAAGFSD GAVHLFRLST 180 GAHISTFYPQ HRDRLGRFSS AVSGIVLSDS RLVFATLDGD IHTAVVGGDG AAPLRRAHLG 240 DVVNDGALVD FAGGDQWWVG LFAGVPGHAF HIWNGQTEEL VFVGGTLTDP EAVMGWHLLT 300 ELTDLIGRVR VTGRGTTALA CTSLRAVAFD LQNQGVVLAE EEFRRGVVVG SFDAANASAV 360 VADVRGGATV RRVDDLAEVC RFSVRGAAGA QGEVLGCVNG GFGVVWGGGI IRVWEIELYG 420 QYLYSFREGI GICNALIADE RYVAACSSDG TIHLWDFGAQ * |
| Functional Description ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Description | |||||
| UniProt | Transcriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule. | |||||
| Cis-element ? help Back to Top | |
|---|---|
| Source | Link |
| PlantRegMap | Migut.K00325.1.p |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_012841060.1 | 0.0 | PREDICTED: transcriptional regulator STERILE APETALA | ||||
| Swissprot | Q9FKH1 | 1e-159 | SAP_ARATH; Transcriptional regulator STERILE APETALA | ||||
| TrEMBL | A0A022R2A4 | 0.0 | A0A022R2A4_ERYGU; Uncharacterized protein | ||||
| STRING | Migut.K00325.1.p | 0.0 | (Erythranthe guttata) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Asterids | OGEA4099 | 23 | 45 |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G35770.1 | 1e-149 | SAP family protein | ||||
| Link Out ? help Back to Top | |
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| Phytozome | Migut.K00325.1.p |
| Entrez Gene | 105961382 |
| Publications ? help Back to Top | |||
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